Experiment: syringaldehyde 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0933 and Ga0059261_0934 are separated by 70 nucleotides Ga0059261_0934 and Ga0059261_0935 are separated by 151 nucleotides Ga0059261_0935 and Ga0059261_0936 are separated by 46 nucleotides Ga0059261_0936 and Ga0059261_0937 are separated by 35 nucleotides
Ga0059261_0933: Ga0059261_0933 - Molybdopterin biosynthesis enzyme, at 964,237 to 965,421
_0933
Ga0059261_0934: Ga0059261_0934 - SOS regulatory protein LexA, at 965,492 to 966,178
_0934
Ga0059261_0935: Ga0059261_0935 - Uncharacterized conserved protein, at 966,330 to 966,737
_0935
Ga0059261_0936: Ga0059261_0936 - phenazine biosynthesis protein PhzF family, at 966,784 to 967,671
_0936
Ga0059261_0937: Ga0059261_0937 - Predicted transcriptional regulators, at 967,707 to 968,036
_0937
Position (kb) 966
967 Strain fitness (log2 ratio) -2
-1
0
1
2 at 965.440 kb on + strand at 965.970 kb on - strand, within Ga0059261_0934 at 966.053 kb on + strand, within Ga0059261_0934 at 966.174 kb on - strand at 966.214 kb on + strand at 966.215 kb on - strand at 966.258 kb on + strand at 966.259 kb on - strand at 966.294 kb on + strand at 966.294 kb on + strand at 966.372 kb on + strand, within Ga0059261_0935 at 966.373 kb on - strand, within Ga0059261_0935 at 966.373 kb on - strand, within Ga0059261_0935 at 966.416 kb on + strand, within Ga0059261_0935 at 966.416 kb on + strand, within Ga0059261_0935 at 966.416 kb on + strand at 966.417 kb on - strand, within Ga0059261_0935 at 966.417 kb on - strand, within Ga0059261_0935 at 966.510 kb on + strand, within Ga0059261_0935 at 966.510 kb on + strand at 966.510 kb on + strand, within Ga0059261_0935 at 966.510 kb on + strand, within Ga0059261_0935 at 966.511 kb on - strand, within Ga0059261_0935 at 966.511 kb on - strand, within Ga0059261_0935 at 966.934 kb on - strand, within Ga0059261_0936 at 966.934 kb on - strand, within Ga0059261_0936 at 967.058 kb on + strand, within Ga0059261_0936 at 967.058 kb on + strand, within Ga0059261_0936 at 967.058 kb on + strand, within Ga0059261_0936 at 967.059 kb on - strand, within Ga0059261_0936 at 967.059 kb on - strand, within Ga0059261_0936 at 967.059 kb on - strand, within Ga0059261_0936 at 967.059 kb on - strand, within Ga0059261_0936 at 967.059 kb on - strand, within Ga0059261_0936 at 967.175 kb on + strand, within Ga0059261_0936 at 967.175 kb on + strand, within Ga0059261_0936 at 967.175 kb on + strand, within Ga0059261_0936 at 967.175 kb on + strand, within Ga0059261_0936 at 967.176 kb on - strand, within Ga0059261_0936 at 967.176 kb on - strand, within Ga0059261_0936 at 967.176 kb on - strand, within Ga0059261_0936 at 967.176 kb on - strand, within Ga0059261_0936 at 967.176 kb on - strand, within Ga0059261_0936 at 967.176 kb on - strand, within Ga0059261_0936 at 967.176 kb on - strand, within Ga0059261_0936 at 967.176 kb on - strand, within Ga0059261_0936 at 967.176 kb on - strand, within Ga0059261_0936 at 967.176 kb on - strand, within Ga0059261_0936 at 967.219 kb on + strand, within Ga0059261_0936 at 967.479 kb on + strand, within Ga0059261_0936 at 967.479 kb on + strand, within Ga0059261_0936 at 967.479 kb on + strand, within Ga0059261_0936 at 967.479 kb on + strand, within Ga0059261_0936 at 967.479 kb on + strand at 967.479 kb on + strand, within Ga0059261_0936 at 967.495 kb on - strand, within Ga0059261_0936 at 967.711 kb on - strand at 967.734 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction syringaldehyde 1 mM remove 965,440 + -0.4 965,970 - Ga0059261_0934 0.70 -0.3 966,053 + Ga0059261_0934 0.82 -1.4 966,174 - +2.5 966,214 + +0.5 966,215 - +0.3 966,258 + +0.9 966,259 - +0.4 966,294 + +1.1 966,294 + -0.2 966,372 + Ga0059261_0935 0.10 +0.4 966,373 - Ga0059261_0935 0.11 -1.3 966,373 - Ga0059261_0935 0.11 -0.1 966,416 + Ga0059261_0935 0.21 +0.7 966,416 + Ga0059261_0935 0.21 +0.3 966,416 + -0.1 966,417 - Ga0059261_0935 0.21 -1.6 966,417 - Ga0059261_0935 0.21 +0.6 966,510 + Ga0059261_0935 0.44 +0.3 966,510 + +0.9 966,510 + Ga0059261_0935 0.44 +0.2 966,510 + Ga0059261_0935 0.44 -0.1 966,511 - Ga0059261_0935 0.44 +0.3 966,511 - Ga0059261_0935 0.44 +0.2 966,934 - Ga0059261_0936 0.17 +0.8 966,934 - Ga0059261_0936 0.17 -0.6 967,058 + Ga0059261_0936 0.31 +0.1 967,058 + Ga0059261_0936 0.31 +0.5 967,058 + Ga0059261_0936 0.31 +0.1 967,059 - Ga0059261_0936 0.31 +0.3 967,059 - Ga0059261_0936 0.31 +0.2 967,059 - Ga0059261_0936 0.31 -0.3 967,059 - Ga0059261_0936 0.31 +0.6 967,059 - Ga0059261_0936 0.31 +0.3 967,175 + Ga0059261_0936 0.44 -1.1 967,175 + Ga0059261_0936 0.44 +0.2 967,175 + Ga0059261_0936 0.44 +0.6 967,175 + Ga0059261_0936 0.44 +0.6 967,176 - Ga0059261_0936 0.44 -2.2 967,176 - Ga0059261_0936 0.44 +0.9 967,176 - Ga0059261_0936 0.44 +0.0 967,176 - Ga0059261_0936 0.44 -0.3 967,176 - Ga0059261_0936 0.44 +0.1 967,176 - Ga0059261_0936 0.44 +1.1 967,176 - Ga0059261_0936 0.44 -1.1 967,176 - Ga0059261_0936 0.44 +0.8 967,176 - Ga0059261_0936 0.44 +0.3 967,176 - Ga0059261_0936 0.44 +0.2 967,219 + Ga0059261_0936 0.49 -1.7 967,479 + Ga0059261_0936 0.78 +0.7 967,479 + Ga0059261_0936 0.78 -0.2 967,479 + Ga0059261_0936 0.78 -0.1 967,479 + Ga0059261_0936 0.78 -0.1 967,479 + +0.9 967,479 + Ga0059261_0936 0.78 -0.0 967,495 - Ga0059261_0936 0.80 +0.2 967,711 - +0.1 967,734 + -0.2
Or see this region's nucleotide sequence