Experiment: syringaldehyde 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0916 and Ga0059261_0917 are separated by 10 nucleotides Ga0059261_0917 and Ga0059261_0918 are separated by 22 nucleotides Ga0059261_0918 and Ga0059261_0919 overlap by 4 nucleotides Ga0059261_0919 and Ga0059261_0920 overlap by 1 nucleotides
Ga0059261_0916: Ga0059261_0916 - HPr Serine kinase C-terminal domain, at 950,420 to 950,860
_0916
Ga0059261_0917: Ga0059261_0917 - Predicted P-loop-containing kinase, at 950,871 to 951,791
_0917
Ga0059261_0918: Ga0059261_0918 - Phosphotransferase system, mannose/fructose-specific component IIA, at 951,814 to 952,221
_0918
Ga0059261_0919: Ga0059261_0919 - Phosphotransferase System HPr (HPr) Family, at 952,218 to 952,490
_0919
Ga0059261_0920: Ga0059261_0920 - rRNA methylases, at 952,490 to 953,293
_0920
Position (kb) 951
952
953 Strain fitness (log2 ratio) -1
0
1 at 951.066 kb on - strand, within Ga0059261_0917 at 951.141 kb on + strand, within Ga0059261_0917 at 951.159 kb on + strand, within Ga0059261_0917 at 951.159 kb on + strand, within Ga0059261_0917 at 951.160 kb on - strand, within Ga0059261_0917 at 951.160 kb on - strand, within Ga0059261_0917 at 951.195 kb on + strand, within Ga0059261_0917 at 951.195 kb on + strand, within Ga0059261_0917 at 951.195 kb on + strand, within Ga0059261_0917 at 951.196 kb on - strand, within Ga0059261_0917 at 951.196 kb on - strand, within Ga0059261_0917 at 951.196 kb on - strand, within Ga0059261_0917 at 951.197 kb on + strand, within Ga0059261_0917 at 951.197 kb on + strand, within Ga0059261_0917 at 951.197 kb on + strand, within Ga0059261_0917 at 951.197 kb on + strand, within Ga0059261_0917 at 951.198 kb on - strand, within Ga0059261_0917 at 951.198 kb on - strand, within Ga0059261_0917 at 951.528 kb on + strand, within Ga0059261_0917 at 951.529 kb on - strand, within Ga0059261_0917 at 951.529 kb on - strand, within Ga0059261_0917 at 951.529 kb on - strand, within Ga0059261_0917 at 951.529 kb on - strand, within Ga0059261_0917 at 951.529 kb on - strand, within Ga0059261_0917 at 951.529 kb on - strand, within Ga0059261_0917 at 951.549 kb on + strand, within Ga0059261_0917 at 951.549 kb on + strand, within Ga0059261_0917 at 951.550 kb on - strand, within Ga0059261_0917 at 951.624 kb on + strand, within Ga0059261_0917 at 951.624 kb on + strand, within Ga0059261_0917 at 951.624 kb on + strand, within Ga0059261_0917 at 951.625 kb on - strand, within Ga0059261_0917 at 951.629 kb on + strand, within Ga0059261_0917 at 951.629 kb on + strand, within Ga0059261_0917 at 951.629 kb on + strand, within Ga0059261_0917 at 951.629 kb on + strand, within Ga0059261_0917 at 951.629 kb on + strand, within Ga0059261_0917 at 951.630 kb on - strand, within Ga0059261_0917 at 951.630 kb on - strand, within Ga0059261_0917 at 951.630 kb on - strand, within Ga0059261_0917 at 951.630 kb on - strand, within Ga0059261_0917 at 951.630 kb on - strand, within Ga0059261_0917 at 951.630 kb on - strand, within Ga0059261_0917 at 951.766 kb on + strand at 951.766 kb on + strand at 951.766 kb on + strand at 951.828 kb on - strand at 951.907 kb on - strand, within Ga0059261_0918 at 951.907 kb on - strand, within Ga0059261_0918 at 951.907 kb on - strand, within Ga0059261_0918 at 951.933 kb on + strand, within Ga0059261_0918 at 951.934 kb on - strand, within Ga0059261_0918 at 951.934 kb on - strand, within Ga0059261_0918 at 952.177 kb on + strand, within Ga0059261_0918 at 952.177 kb on + strand, within Ga0059261_0918 at 952.177 kb on + strand, within Ga0059261_0918 at 952.177 kb on + strand, within Ga0059261_0918 at 952.177 kb on + strand, within Ga0059261_0918 at 952.177 kb on + strand at 952.178 kb on - strand, within Ga0059261_0918 at 952.178 kb on - strand, within Ga0059261_0918 at 952.178 kb on - strand, within Ga0059261_0918 at 952.178 kb on - strand, within Ga0059261_0918 at 952.178 kb on - strand, within Ga0059261_0918 at 952.178 kb on - strand, within Ga0059261_0918 at 952.178 kb on - strand, within Ga0059261_0918 at 952.637 kb on + strand, within Ga0059261_0920 at 952.637 kb on + strand, within Ga0059261_0920 at 952.638 kb on - strand, within Ga0059261_0920 at 952.638 kb on - strand, within Ga0059261_0920 at 952.638 kb on - strand, within Ga0059261_0920 at 952.638 kb on - strand, within Ga0059261_0920 at 952.791 kb on - strand, within Ga0059261_0920 at 952.897 kb on + strand, within Ga0059261_0920 at 953.168 kb on + strand, within Ga0059261_0920 at 953.168 kb on + strand, within Ga0059261_0920 at 953.200 kb on - strand, within Ga0059261_0920 at 953.221 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction syringaldehyde 1 mM remove 951,066 - Ga0059261_0917 0.21 -0.9 951,141 + Ga0059261_0917 0.29 +0.3 951,159 + Ga0059261_0917 0.31 +0.2 951,159 + Ga0059261_0917 0.31 -0.4 951,160 - Ga0059261_0917 0.31 -0.7 951,160 - Ga0059261_0917 0.31 -1.1 951,195 + Ga0059261_0917 0.35 -0.4 951,195 + Ga0059261_0917 0.35 -0.3 951,195 + Ga0059261_0917 0.35 +0.5 951,196 - Ga0059261_0917 0.35 +0.3 951,196 - Ga0059261_0917 0.35 -0.1 951,196 - Ga0059261_0917 0.35 -1.2 951,197 + Ga0059261_0917 0.35 -0.1 951,197 + Ga0059261_0917 0.35 +0.4 951,197 + Ga0059261_0917 0.35 -0.4 951,197 + Ga0059261_0917 0.35 -1.4 951,198 - Ga0059261_0917 0.36 +0.2 951,198 - Ga0059261_0917 0.36 -0.2 951,528 + Ga0059261_0917 0.71 +0.9 951,529 - Ga0059261_0917 0.71 +0.9 951,529 - Ga0059261_0917 0.71 -0.8 951,529 - Ga0059261_0917 0.71 -0.6 951,529 - Ga0059261_0917 0.71 -0.6 951,529 - Ga0059261_0917 0.71 -0.3 951,529 - Ga0059261_0917 0.71 -0.7 951,549 + Ga0059261_0917 0.74 -0.4 951,549 + Ga0059261_0917 0.74 -0.2 951,550 - Ga0059261_0917 0.74 -0.3 951,624 + Ga0059261_0917 0.82 -0.5 951,624 + Ga0059261_0917 0.82 -0.5 951,624 + Ga0059261_0917 0.82 -0.4 951,625 - Ga0059261_0917 0.82 +0.7 951,629 + Ga0059261_0917 0.82 +0.0 951,629 + Ga0059261_0917 0.82 +0.0 951,629 + Ga0059261_0917 0.82 +0.4 951,629 + Ga0059261_0917 0.82 +1.0 951,629 + Ga0059261_0917 0.82 -0.1 951,630 - Ga0059261_0917 0.82 -0.2 951,630 - Ga0059261_0917 0.82 -1.3 951,630 - Ga0059261_0917 0.82 -0.2 951,630 - Ga0059261_0917 0.82 -1.2 951,630 - Ga0059261_0917 0.82 -0.2 951,630 - Ga0059261_0917 0.82 +0.5 951,766 + +0.9 951,766 + -0.0 951,766 + +0.2 951,828 - -0.4 951,907 - Ga0059261_0918 0.23 -1.4 951,907 - Ga0059261_0918 0.23 -1.1 951,907 - Ga0059261_0918 0.23 +0.1 951,933 + Ga0059261_0918 0.29 -0.4 951,934 - Ga0059261_0918 0.29 -0.7 951,934 - Ga0059261_0918 0.29 -0.8 952,177 + Ga0059261_0918 0.89 -0.2 952,177 + Ga0059261_0918 0.89 +0.4 952,177 + Ga0059261_0918 0.89 +0.3 952,177 + Ga0059261_0918 0.89 +0.2 952,177 + Ga0059261_0918 0.89 +0.0 952,177 + -0.1 952,178 - Ga0059261_0918 0.89 -1.2 952,178 - Ga0059261_0918 0.89 +0.2 952,178 - Ga0059261_0918 0.89 -1.7 952,178 - Ga0059261_0918 0.89 -1.1 952,178 - Ga0059261_0918 0.89 -0.1 952,178 - Ga0059261_0918 0.89 -1.1 952,178 - Ga0059261_0918 0.89 -0.7 952,637 + Ga0059261_0920 0.18 +0.0 952,637 + Ga0059261_0920 0.18 -0.5 952,638 - Ga0059261_0920 0.18 -0.5 952,638 - Ga0059261_0920 0.18 +0.6 952,638 - Ga0059261_0920 0.18 +0.2 952,638 - Ga0059261_0920 0.18 +0.0 952,791 - Ga0059261_0920 0.37 -0.8 952,897 + Ga0059261_0920 0.51 +0.3 953,168 + Ga0059261_0920 0.84 -0.1 953,168 + Ga0059261_0920 0.84 -0.7 953,200 - Ga0059261_0920 0.88 -0.3 953,221 + -1.7
Or see this region's nucleotide sequence