Experiment: syringaldehyde 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0492 and Ga0059261_0493 are separated by 83 nucleotides Ga0059261_0493 and Ga0059261_0494 are separated by 20 nucleotides Ga0059261_0494 and Ga0059261_0495 overlap by 1 nucleotides
Ga0059261_0492: Ga0059261_0492 - Predicted phosphatase, at 485,500 to 486,855
_0492
Ga0059261_0493: Ga0059261_0493 - hypothetical protein, at 486,939 to 487,226
_0493
Ga0059261_0494: Ga0059261_0494 - ABC-type antimicrobial peptide transport system, ATPase component, at 487,247 to 487,903
_0494
Ga0059261_0495: Ga0059261_0495 - ABC-type transport system, involved in lipoprotein release, permease component, at 487,903 to 489,186
_0495
Position (kb) 486
487
488 Strain fitness (log2 ratio) -1
0
1
2 at 485.954 kb on + strand, within Ga0059261_0492 at 486.018 kb on - strand, within Ga0059261_0492 at 486.186 kb on - strand, within Ga0059261_0492 at 486.186 kb on - strand, within Ga0059261_0492 at 486.420 kb on - strand, within Ga0059261_0492 at 486.452 kb on + strand, within Ga0059261_0492 at 486.452 kb on + strand, within Ga0059261_0492 at 486.452 kb on + strand, within Ga0059261_0492 at 486.452 kb on + strand, within Ga0059261_0492 at 486.452 kb on + strand, within Ga0059261_0492 at 486.453 kb on - strand, within Ga0059261_0492 at 486.453 kb on - strand, within Ga0059261_0492 at 486.453 kb on - strand, within Ga0059261_0492 at 486.506 kb on + strand, within Ga0059261_0492 at 486.506 kb on + strand, within Ga0059261_0492 at 486.507 kb on - strand, within Ga0059261_0492 at 486.613 kb on + strand, within Ga0059261_0492 at 486.614 kb on - strand, within Ga0059261_0492 at 486.624 kb on + strand, within Ga0059261_0492 at 486.692 kb on + strand, within Ga0059261_0492 at 486.692 kb on + strand, within Ga0059261_0492 at 486.693 kb on - strand, within Ga0059261_0492 at 486.693 kb on - strand, within Ga0059261_0492 at 486.693 kb on - strand, within Ga0059261_0492 at 486.693 kb on - strand, within Ga0059261_0492 at 486.919 kb on - strand at 487.162 kb on + strand, within Ga0059261_0493 at 487.162 kb on + strand, within Ga0059261_0493 at 487.209 kb on + strand at 487.209 kb on + strand at 487.209 kb on + strand at 487.209 kb on + strand at 487.209 kb on + strand at 487.209 kb on + strand at 487.210 kb on - strand at 487.210 kb on - strand at 487.210 kb on - strand at 487.210 kb on - strand at 487.210 kb on - strand at 487.210 kb on - strand at 487.210 kb on - strand at 487.210 kb on - strand at 487.224 kb on + strand at 487.244 kb on + strand at 487.244 kb on + strand at 487.244 kb on + strand at 487.244 kb on + strand at 487.244 kb on + strand at 487.244 kb on + strand at 487.245 kb on - strand at 487.245 kb on - strand at 487.245 kb on - strand at 487.245 kb on - strand at 487.257 kb on + strand at 487.257 kb on + strand at 487.258 kb on - strand at 487.258 kb on - strand at 487.258 kb on - strand at 487.271 kb on - strand at 487.271 kb on - strand at 487.542 kb on + strand, within Ga0059261_0494 at 487.543 kb on - strand, within Ga0059261_0494 at 487.663 kb on + strand, within Ga0059261_0494 at 487.924 kb on + strand at 487.924 kb on + strand at 487.924 kb on + strand at 487.924 kb on + strand at 487.925 kb on - strand at 487.925 kb on - strand at 487.925 kb on - strand at 487.925 kb on - strand at 487.925 kb on - strand at 487.925 kb on - strand at 487.926 kb on + strand at 487.926 kb on + strand at 487.927 kb on - strand at 487.927 kb on - strand at 487.927 kb on - strand at 488.110 kb on + strand, within Ga0059261_0495 at 488.110 kb on + strand at 488.110 kb on + strand, within Ga0059261_0495 at 488.110 kb on + strand, within Ga0059261_0495 at 488.111 kb on - strand, within Ga0059261_0495 at 488.111 kb on - strand, within Ga0059261_0495 at 488.111 kb on - strand, within Ga0059261_0495 at 488.111 kb on - strand, within Ga0059261_0495 at 488.111 kb on - strand, within Ga0059261_0495 at 488.137 kb on - strand, within Ga0059261_0495
Per-strain Table
Position Strand Gene LocusTag Fraction syringaldehyde 1 mM remove 485,954 + Ga0059261_0492 0.33 +0.2 486,018 - Ga0059261_0492 0.38 -0.2 486,186 - Ga0059261_0492 0.51 +0.4 486,186 - Ga0059261_0492 0.51 -0.1 486,420 - Ga0059261_0492 0.68 -0.0 486,452 + Ga0059261_0492 0.70 -0.3 486,452 + Ga0059261_0492 0.70 +0.0 486,452 + Ga0059261_0492 0.70 +0.6 486,452 + Ga0059261_0492 0.70 -0.3 486,452 + Ga0059261_0492 0.70 -0.3 486,453 - Ga0059261_0492 0.70 -0.8 486,453 - Ga0059261_0492 0.70 +0.4 486,453 - Ga0059261_0492 0.70 +0.9 486,506 + Ga0059261_0492 0.74 -0.3 486,506 + Ga0059261_0492 0.74 +0.7 486,507 - Ga0059261_0492 0.74 -0.1 486,613 + Ga0059261_0492 0.82 -0.6 486,614 - Ga0059261_0492 0.82 +0.5 486,624 + Ga0059261_0492 0.83 -0.1 486,692 + Ga0059261_0492 0.88 +0.1 486,692 + Ga0059261_0492 0.88 -0.1 486,693 - Ga0059261_0492 0.88 -0.5 486,693 - Ga0059261_0492 0.88 +0.1 486,693 - Ga0059261_0492 0.88 -0.2 486,693 - Ga0059261_0492 0.88 +0.4 486,919 - +0.7 487,162 + Ga0059261_0493 0.77 -1.1 487,162 + Ga0059261_0493 0.77 -0.3 487,209 + -0.2 487,209 + -0.6 487,209 + +0.1 487,209 + -0.4 487,209 + -0.3 487,209 + +0.9 487,210 - -0.1 487,210 - -0.7 487,210 - -0.2 487,210 - -0.0 487,210 - +2.7 487,210 - +0.2 487,210 - -0.4 487,210 - +0.7 487,224 + -0.3 487,244 + -0.7 487,244 + -1.3 487,244 + -0.4 487,244 + +0.9 487,244 + -0.5 487,244 + +0.4 487,245 - -0.1 487,245 - +0.9 487,245 - -0.4 487,245 - +0.3 487,257 + +0.0 487,257 + -1.3 487,258 - +0.9 487,258 - -0.4 487,258 - -0.6 487,271 - +0.6 487,271 - +0.9 487,542 + Ga0059261_0494 0.45 -0.9 487,543 - Ga0059261_0494 0.45 -0.5 487,663 + Ga0059261_0494 0.63 -0.2 487,924 + +0.6 487,924 + +2.2 487,924 + +1.2 487,924 + -1.3 487,925 - -0.6 487,925 - +0.3 487,925 - +0.5 487,925 - +0.1 487,925 - +0.6 487,925 - -0.8 487,926 + -0.9 487,926 + -0.4 487,927 - +1.2 487,927 - +0.5 487,927 - -0.3 488,110 + Ga0059261_0495 0.16 +0.1 488,110 + +1.9 488,110 + Ga0059261_0495 0.16 +0.5 488,110 + Ga0059261_0495 0.16 -0.9 488,111 - Ga0059261_0495 0.16 +0.5 488,111 - Ga0059261_0495 0.16 +0.4 488,111 - Ga0059261_0495 0.16 -0.0 488,111 - Ga0059261_0495 0.16 +0.5 488,111 - Ga0059261_0495 0.16 +0.8 488,137 - Ga0059261_0495 0.18 -1.1
Or see this region's nucleotide sequence