Experiment: syringaldehyde 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0289 and Ga0059261_0290 are separated by 63 nucleotides Ga0059261_0290 and Ga0059261_0291 are separated by 64 nucleotides Ga0059261_0291 and Ga0059261_0292 are separated by 6 nucleotides
Ga0059261_0289: Ga0059261_0289 - thiamine biosynthesis protein ThiS, at 274,143 to 275,153
_0289
Ga0059261_0290: Ga0059261_0290 - 3-dehydroquinate dehydratase (EC 4.2.1.10), at 275,217 to 275,651
_0290
Ga0059261_0291: Ga0059261_0291 - acetyl-CoA carboxylase, biotin carboxyl carrier protein, at 275,716 to 276,201
_0291
Ga0059261_0292: Ga0059261_0292 - acetyl-CoA carboxylase, biotin carboxylase subunit, at 276,208 to 277,572
_0292
Position (kb) 275
276 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 275.179 kb on - strand at 275.179 kb on - strand at 275.180 kb on + strand at 275.180 kb on + strand at 275.180 kb on + strand at 275.180 kb on + strand at 275.181 kb on - strand at 275.181 kb on - strand at 275.181 kb on - strand at 275.181 kb on - strand at 275.181 kb on - strand at 275.181 kb on - strand at 275.181 kb on - strand at 275.226 kb on - strand at 275.232 kb on + strand at 275.232 kb on + strand at 275.232 kb on + strand at 275.232 kb on + strand at 275.232 kb on + strand at 275.232 kb on + strand at 275.233 kb on - strand at 275.233 kb on - strand at 275.233 kb on - strand at 275.233 kb on - strand at 275.233 kb on - strand at 275.233 kb on - strand at 275.236 kb on + strand at 275.287 kb on - strand, within Ga0059261_0290 at 275.454 kb on + strand, within Ga0059261_0290 at 275.454 kb on + strand, within Ga0059261_0290 at 275.455 kb on - strand at 275.455 kb on - strand, within Ga0059261_0290 at 275.455 kb on - strand, within Ga0059261_0290 at 275.479 kb on - strand, within Ga0059261_0290 at 275.479 kb on - strand, within Ga0059261_0290 at 275.486 kb on + strand, within Ga0059261_0290 at 275.523 kb on - strand, within Ga0059261_0290 at 275.565 kb on + strand, within Ga0059261_0290 at 275.565 kb on + strand, within Ga0059261_0290 at 275.565 kb on + strand, within Ga0059261_0290 at 275.565 kb on + strand, within Ga0059261_0290 at 275.565 kb on + strand, within Ga0059261_0290 at 275.565 kb on + strand, within Ga0059261_0290 at 275.565 kb on + strand, within Ga0059261_0290 at 275.566 kb on - strand, within Ga0059261_0290 at 275.566 kb on - strand, within Ga0059261_0290 at 275.566 kb on - strand, within Ga0059261_0290 at 275.616 kb on + strand at 275.616 kb on + strand at 275.616 kb on + strand at 275.616 kb on + strand at 275.616 kb on + strand at 275.616 kb on + strand at 275.665 kb on + strand at 275.665 kb on + strand at 275.667 kb on + strand at 275.667 kb on + strand at 275.667 kb on + strand at 275.667 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction syringaldehyde 1 mM remove 275,179 - +1.0 275,179 - +0.5 275,180 + +0.3 275,180 + -2.9 275,180 + -1.4 275,180 + -1.8 275,181 - +0.3 275,181 - +1.2 275,181 - +0.8 275,181 - -0.5 275,181 - +0.5 275,181 - +0.7 275,181 - -0.3 275,226 - -0.7 275,232 + -1.0 275,232 + +0.2 275,232 + -0.4 275,232 + -0.4 275,232 + -0.8 275,232 + +0.4 275,233 - +0.0 275,233 - -0.2 275,233 - -0.6 275,233 - +1.2 275,233 - +0.3 275,233 - +0.0 275,236 + -0.9 275,287 - Ga0059261_0290 0.16 -1.0 275,454 + Ga0059261_0290 0.54 +0.9 275,454 + Ga0059261_0290 0.54 +1.5 275,455 - +0.3 275,455 - Ga0059261_0290 0.55 -2.1 275,455 - Ga0059261_0290 0.55 -0.4 275,479 - Ga0059261_0290 0.60 -0.5 275,479 - Ga0059261_0290 0.60 +0.9 275,486 + Ga0059261_0290 0.62 -1.3 275,523 - Ga0059261_0290 0.70 -0.4 275,565 + Ga0059261_0290 0.80 -0.8 275,565 + Ga0059261_0290 0.80 +0.0 275,565 + Ga0059261_0290 0.80 +0.2 275,565 + Ga0059261_0290 0.80 -0.4 275,565 + Ga0059261_0290 0.80 -0.1 275,565 + Ga0059261_0290 0.80 +0.2 275,565 + Ga0059261_0290 0.80 -1.2 275,566 - Ga0059261_0290 0.80 +0.9 275,566 - Ga0059261_0290 0.80 -0.6 275,566 - Ga0059261_0290 0.80 -1.4 275,616 + +1.2 275,616 + +0.1 275,616 + +0.9 275,616 + +0.1 275,616 + -0.1 275,616 + +0.2 275,665 + +0.2 275,665 + -0.2 275,667 + -0.7 275,667 + +0.2 275,667 + +0.9 275,667 + +0.9
Or see this region's nucleotide sequence