Experiment: syringaldehyde 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0222 and Ga0059261_0223 are separated by 25 nucleotides Ga0059261_0223 and Ga0059261_0224 are separated by 75 nucleotides
Ga0059261_0222: Ga0059261_0222 - ribonuclease D, at 211,730 to 212,989
_0222
Ga0059261_0223: Ga0059261_0223 - Peptidase inhibitor I78 family, at 213,015 to 213,296
_0223
Ga0059261_0224: Ga0059261_0224 - Exopolyphosphatase, at 213,372 to 214,874
_0224
Position (kb) 213
214 Strain fitness (log2 ratio) -1
0
1 at 212.935 kb on + strand at 212.936 kb on - strand at 212.950 kb on + strand at 212.950 kb on + strand at 212.951 kb on - strand at 212.951 kb on - strand at 212.951 kb on - strand at 212.951 kb on - strand at 212.951 kb on - strand at 212.987 kb on + strand at 212.988 kb on - strand at 212.988 kb on - strand at 213.053 kb on + strand, within Ga0059261_0223 at 213.054 kb on - strand, within Ga0059261_0223 at 213.069 kb on + strand at 213.294 kb on + strand at 213.322 kb on + strand at 213.700 kb on - strand, within Ga0059261_0224 at 213.953 kb on - strand, within Ga0059261_0224 at 213.953 kb on - strand, within Ga0059261_0224 at 214.156 kb on + strand, within Ga0059261_0224 at 214.157 kb on - strand, within Ga0059261_0224 at 214.157 kb on - strand, within Ga0059261_0224 at 214.157 kb on - strand, within Ga0059261_0224 at 214.237 kb on + strand, within Ga0059261_0224 at 214.237 kb on + strand, within Ga0059261_0224 at 214.238 kb on - strand, within Ga0059261_0224 at 214.238 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction syringaldehyde 1 mM remove 212,935 + +0.9 212,936 - -0.3 212,950 + +0.0 212,950 + -0.1 212,951 - +0.5 212,951 - +0.6 212,951 - -0.1 212,951 - +0.0 212,951 - -0.4 212,987 + -1.1 212,988 - +0.4 212,988 - +1.2 213,053 + Ga0059261_0223 0.13 -0.3 213,054 - Ga0059261_0223 0.14 -0.8 213,069 + -0.7 213,294 + +0.0 213,322 + +0.9 213,700 - Ga0059261_0224 0.22 +0.1 213,953 - Ga0059261_0224 0.39 +0.1 213,953 - Ga0059261_0224 0.39 -0.8 214,156 + Ga0059261_0224 0.52 +0.2 214,157 - Ga0059261_0224 0.52 -1.0 214,157 - Ga0059261_0224 0.52 -1.1 214,157 - Ga0059261_0224 0.52 -0.1 214,237 + Ga0059261_0224 0.58 -0.5 214,237 + Ga0059261_0224 0.58 -0.1 214,238 - Ga0059261_0224 0.58 -0.6 214,238 - -0.7
Or see this region's nucleotide sequence