Experiment: syringaldehyde 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0160 and Ga0059261_0161 overlap by 4 nucleotides Ga0059261_0161 and Ga0059261_0162 overlap by 1 nucleotides Ga0059261_0162 and Ga0059261_0163 are separated by 158 nucleotides Ga0059261_0163 and Ga0059261_0164 are separated by 16 nucleotides Ga0059261_0164 and Ga0059261_0165 are separated by 156 nucleotides Ga0059261_0165 and Ga0059261_0166 are separated by 88 nucleotides Ga0059261_0166 and Ga0059261_0167 are separated by 108 nucleotides
Ga0059261_0160: Ga0059261_0160 - Molybdopterin converting factor, large subunit, at 150,627 to 151,085
_0160
Ga0059261_0161: Ga0059261_0161 - molybdopterin converting factor, subunit 1, non-archaeal, at 151,082 to 151,333
_0161
Ga0059261_0162: Ga0059261_0162 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, at 151,333 to 151,887
_0162
Ga0059261_0163: Ga0059261_0163 - Major Facilitator Superfamily, at 152,046 to 153,341
_0163
Ga0059261_0164: Ga0059261_0164 - hypothetical protein, at 153,358 to 153,525
_0164
Ga0059261_0165: Ga0059261_0165 - tRNA, at 153,682 to 153,757
_0165
Ga0059261_0166: Ga0059261_0166 - TIGR02300 family protein, at 153,846 to 154,163
_0166
Ga0059261_0167: Ga0059261_0167 - 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19), at 154,272 to 155,603
_0167
Position (kb)
152
153
154 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 151.130 kb on + strand, within Ga0059261_0161 at 151.131 kb on - strand, within Ga0059261_0161 at 151.131 kb on - strand, within Ga0059261_0161 at 151.131 kb on - strand, within Ga0059261_0161 at 151.131 kb on - strand, within Ga0059261_0161 at 151.131 kb on - strand, within Ga0059261_0161 at 151.320 kb on + strand at 151.320 kb on + strand at 151.321 kb on - strand at 151.321 kb on - strand at 151.338 kb on + strand at 151.338 kb on + strand at 151.338 kb on + strand at 151.338 kb on + strand at 151.338 kb on + strand at 151.338 kb on + strand at 151.338 kb on + strand at 151.339 kb on - strand at 151.339 kb on - strand at 151.339 kb on - strand at 151.339 kb on - strand at 151.339 kb on - strand at 151.339 kb on - strand at 151.945 kb on + strand at 151.945 kb on + strand at 152.005 kb on - strand at 152.371 kb on - strand, within Ga0059261_0163 at 152.451 kb on + strand, within Ga0059261_0163 at 152.524 kb on - strand, within Ga0059261_0163 at 152.524 kb on - strand, within Ga0059261_0163 at 152.524 kb on - strand, within Ga0059261_0163 at 152.524 kb on - strand, within Ga0059261_0163 at 152.826 kb on - strand, within Ga0059261_0163 at 152.826 kb on - strand, within Ga0059261_0163 at 152.863 kb on + strand, within Ga0059261_0163 at 153.027 kb on + strand, within Ga0059261_0163 at 153.188 kb on + strand, within Ga0059261_0163 at 153.188 kb on + strand, within Ga0059261_0163 at 153.189 kb on - strand, within Ga0059261_0163 at 153.267 kb on - strand at 153.339 kb on + strand at 153.339 kb on + strand at 153.340 kb on - strand at 153.340 kb on - strand at 153.374 kb on + strand at 153.374 kb on + strand at 153.374 kb on + strand at 153.374 kb on + strand at 153.374 kb on + strand at 153.374 kb on + strand at 153.374 kb on + strand at 153.374 kb on + strand at 153.375 kb on - strand, within Ga0059261_0164 at 153.375 kb on - strand, within Ga0059261_0164 at 153.375 kb on - strand, within Ga0059261_0164 at 153.375 kb on - strand, within Ga0059261_0164 at 153.375 kb on - strand, within Ga0059261_0164 at 153.375 kb on - strand, within Ga0059261_0164 at 153.398 kb on + strand, within Ga0059261_0164 at 153.398 kb on + strand, within Ga0059261_0164 at 153.398 kb on + strand, within Ga0059261_0164 at 153.399 kb on - strand, within Ga0059261_0164 at 153.399 kb on - strand, within Ga0059261_0164 at 153.399 kb on - strand, within Ga0059261_0164 at 153.509 kb on + strand at 153.525 kb on + strand at 153.537 kb on - strand at 153.548 kb on + strand at 153.572 kb on + strand at 153.572 kb on + strand at 153.572 kb on + strand at 153.572 kb on + strand at 153.573 kb on - strand at 153.573 kb on - strand at 153.573 kb on - strand at 153.613 kb on + strand at 153.614 kb on - strand at 153.614 kb on - strand at 153.614 kb on - strand at 153.614 kb on - strand at 153.614 kb on - strand at 153.614 kb on - strand at 153.785 kb on - strand at 153.835 kb on - strand at 154.105 kb on + strand, within Ga0059261_0166 at 154.209 kb on + strand at 154.210 kb on - strand at 154.210 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction syringaldehyde 1 mM remove 151,130 + Ga0059261_0161 0.19 +0.6 151,131 - Ga0059261_0161 0.19 +0.5 151,131 - Ga0059261_0161 0.19 -0.4 151,131 - Ga0059261_0161 0.19 +0.1 151,131 - Ga0059261_0161 0.19 +0.5 151,131 - Ga0059261_0161 0.19 -0.1 151,320 + -0.0 151,320 + -0.9 151,321 - +1.1 151,321 - +1.3 151,338 + -0.2 151,338 + +0.5 151,338 + -0.1 151,338 + -0.1 151,338 + +1.6 151,338 + -0.1 151,338 + +0.3 151,339 - -3.1 151,339 - -0.5 151,339 - -0.3 151,339 - +0.0 151,339 - -0.3 151,339 - -1.4 151,945 + +0.4 151,945 + -0.1 152,005 - -1.0 152,371 - Ga0059261_0163 0.25 -2.5 152,451 + Ga0059261_0163 0.31 -0.1 152,524 - Ga0059261_0163 0.37 -0.3 152,524 - Ga0059261_0163 0.37 -1.5 152,524 - Ga0059261_0163 0.37 -2.1 152,524 - Ga0059261_0163 0.37 +0.1 152,826 - Ga0059261_0163 0.60 -1.1 152,826 - Ga0059261_0163 0.60 -0.6 152,863 + Ga0059261_0163 0.63 -1.1 153,027 + Ga0059261_0163 0.76 +0.6 153,188 + Ga0059261_0163 0.88 -1.7 153,188 + Ga0059261_0163 0.88 +2.4 153,189 - Ga0059261_0163 0.88 -1.1 153,267 - -0.7 153,339 + +0.4 153,339 + -0.0 153,340 - -0.7 153,340 - -0.5 153,374 + +0.9 153,374 + -0.2 153,374 + +1.3 153,374 + +0.0 153,374 + +0.6 153,374 + -0.2 153,374 + -0.1 153,374 + -1.1 153,375 - Ga0059261_0164 0.10 +0.1 153,375 - Ga0059261_0164 0.10 -0.0 153,375 - Ga0059261_0164 0.10 -0.0 153,375 - Ga0059261_0164 0.10 -0.4 153,375 - Ga0059261_0164 0.10 +0.2 153,375 - Ga0059261_0164 0.10 +0.3 153,398 + Ga0059261_0164 0.24 -1.8 153,398 + Ga0059261_0164 0.24 +0.3 153,398 + Ga0059261_0164 0.24 +0.1 153,399 - Ga0059261_0164 0.24 +0.2 153,399 - Ga0059261_0164 0.24 -0.3 153,399 - Ga0059261_0164 0.24 -0.1 153,509 + -0.3 153,525 + -1.1 153,537 - -0.0 153,548 + -0.3 153,572 + -0.9 153,572 + +0.3 153,572 + +0.3 153,572 + -0.3 153,573 - +0.5 153,573 - -0.1 153,573 - -0.1 153,613 + +0.3 153,614 - +0.3 153,614 - +1.0 153,614 - +1.1 153,614 - -0.1 153,614 - +0.2 153,614 - -1.0 153,785 - -0.1 153,835 - -0.1 154,105 + Ga0059261_0166 0.81 -1.5 154,209 + +0.9 154,210 - -0.5 154,210 - -0.5
Or see this region's nucleotide sequence