Experiment: syringaldehyde 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0082 and Ga0059261_0083 are separated by 372 nucleotides Ga0059261_0083 and Ga0059261_0084 are separated by 19 nucleotides Ga0059261_0084 and Ga0059261_0085 are separated by 104 nucleotides
Ga0059261_0082: Ga0059261_0082 - aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A (EC 6.3.5.-), at 74,627 to 76,111
_0082
Ga0059261_0083: Ga0059261_0083 - aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC 6.3.5.-), at 76,484 to 77,944
_0083
Ga0059261_0084: Ga0059261_0084 - hypothetical protein, at 77,964 to 78,458
_0084
Ga0059261_0085: Ga0059261_0085 - hypothetical protein, at 78,563 to 79,408
_0085
Position (kb) 76
77
78 Strain fitness (log2 ratio) -2
-1
0
1 at 76.109 kb on + strand at 76.109 kb on + strand at 76.109 kb on + strand at 76.142 kb on + strand at 76.142 kb on + strand at 76.142 kb on + strand at 76.180 kb on + strand at 76.180 kb on + strand at 76.258 kb on + strand at 76.447 kb on + strand at 76.447 kb on + strand at 77.307 kb on - strand, within Ga0059261_0083 at 77.972 kb on + strand at 77.972 kb on + strand at 77.972 kb on + strand at 77.972 kb on + strand at 77.972 kb on + strand at 77.972 kb on + strand at 77.973 kb on - strand at 77.973 kb on - strand at 77.973 kb on - strand at 77.973 kb on - strand at 77.973 kb on - strand at 78.064 kb on - strand, within Ga0059261_0084 at 78.120 kb on + strand, within Ga0059261_0084 at 78.120 kb on + strand, within Ga0059261_0084 at 78.121 kb on - strand, within Ga0059261_0084 at 78.456 kb on + strand at 78.456 kb on + strand at 78.474 kb on + strand at 78.474 kb on + strand at 78.475 kb on - strand at 78.475 kb on - strand at 78.475 kb on - strand at 78.481 kb on + strand at 78.482 kb on - strand at 78.482 kb on - strand at 78.482 kb on - strand at 78.494 kb on + strand at 78.518 kb on + strand at 78.518 kb on + strand at 78.518 kb on + strand at 78.585 kb on + strand at 78.585 kb on + strand at 78.585 kb on + strand at 78.585 kb on + strand at 78.606 kb on + strand at 78.606 kb on + strand at 78.607 kb on - strand at 78.634 kb on + strand at 78.634 kb on + strand at 78.634 kb on + strand at 78.634 kb on + strand at 78.635 kb on - strand at 78.635 kb on - strand at 78.635 kb on - strand at 78.638 kb on + strand at 78.638 kb on + strand at 78.638 kb on + strand at 78.638 kb on + strand at 78.638 kb on + strand at 78.639 kb on - strand at 78.639 kb on - strand at 78.639 kb on - strand at 78.639 kb on - strand at 78.639 kb on - strand at 78.639 kb on - strand at 78.639 kb on - strand at 78.639 kb on - strand at 78.639 kb on - strand at 78.639 kb on - strand at 78.683 kb on + strand, within Ga0059261_0085 at 78.684 kb on - strand, within Ga0059261_0085 at 78.684 kb on - strand, within Ga0059261_0085 at 78.684 kb on - strand, within Ga0059261_0085 at 78.706 kb on + strand, within Ga0059261_0085 at 78.790 kb on + strand, within Ga0059261_0085 at 78.839 kb on - strand, within Ga0059261_0085 at 78.839 kb on - strand, within Ga0059261_0085
Per-strain Table
Position Strand Gene LocusTag Fraction syringaldehyde 1 mM remove 76,109 + +0.1 76,109 + -0.2 76,109 + +0.1 76,142 + +0.0 76,142 + +0.9 76,142 + -1.1 76,180 + +0.1 76,180 + -0.2 76,258 + +0.6 76,447 + +1.1 76,447 + +0.4 77,307 - Ga0059261_0083 0.56 -1.0 77,972 + +0.5 77,972 + +0.2 77,972 + -0.5 77,972 + +0.3 77,972 + -0.1 77,972 + +0.9 77,973 - -0.7 77,973 - +0.2 77,973 - +0.3 77,973 - +1.2 77,973 - +0.1 78,064 - Ga0059261_0084 0.20 +0.6 78,120 + Ga0059261_0084 0.32 -0.0 78,120 + Ga0059261_0084 0.32 -0.1 78,121 - Ga0059261_0084 0.32 +0.3 78,456 + -0.4 78,456 + +0.6 78,474 + +0.4 78,474 + +0.4 78,475 - -0.8 78,475 - -0.7 78,475 - +0.0 78,481 + -0.7 78,482 - +0.1 78,482 - -0.3 78,482 - +0.3 78,494 + -0.4 78,518 + -2.0 78,518 + -0.2 78,518 + -0.1 78,585 + -0.6 78,585 + +0.9 78,585 + +0.3 78,585 + +0.9 78,606 + +0.6 78,606 + -0.5 78,607 - +0.5 78,634 + -0.1 78,634 + -1.7 78,634 + +0.7 78,634 + +0.1 78,635 - -0.4 78,635 - +0.7 78,635 - -0.7 78,638 + +1.1 78,638 + +0.9 78,638 + +0.0 78,638 + -0.4 78,638 + +0.3 78,639 - +0.1 78,639 - +0.1 78,639 - -0.7 78,639 - -0.9 78,639 - -0.1 78,639 - -0.7 78,639 - -0.1 78,639 - -0.3 78,639 - -0.1 78,639 - +0.4 78,683 + Ga0059261_0085 0.14 +0.0 78,684 - Ga0059261_0085 0.14 -0.0 78,684 - Ga0059261_0085 0.14 +0.6 78,684 - Ga0059261_0085 0.14 -0.1 78,706 + Ga0059261_0085 0.17 -0.4 78,790 + Ga0059261_0085 0.27 -0.1 78,839 - Ga0059261_0085 0.33 -0.0 78,839 - Ga0059261_0085 0.33 -0.3
Or see this region's nucleotide sequence