Strain Fitness in Caulobacter crescentus NA1000 around CCNA_00959

Experiment: PYE

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE
1,036,435	+		CCNA_00958	0.36	-0.6
1,036,436	+		CCNA_00958	0.36	-2.1
1,036,443	-		CCNA_00958	0.37	+0.4
1,036,444	-		CCNA_00958	0.37	-1.4
1,036,444	-		CCNA_00958	0.37	-0.5
1,036,483	+		CCNA_00958	0.40	+0.0
1,036,483	+		CCNA_00958	0.40	+1.6
1,036,483	+		CCNA_00958	0.40	+0.8
1,036,483	+		CCNA_00958	0.40	+0.2
1,036,489	-		CCNA_00958	0.40	-0.4
1,036,491	-		CCNA_00958	0.40	+0.5
1,036,491	-		CCNA_00958	0.40	-0.5
1,036,491	-		CCNA_00958	0.40	-0.5
1,036,491	-		CCNA_00958	0.40	+0.3
1,036,491	-		CCNA_00958	0.40	-0.1
1,036,491	-		CCNA_00958	0.40	+0.3
1,036,491	-		CCNA_00958	0.40	-1.5
1,036,491	-		CCNA_00958	0.40	-0.3
1,036,491	-		CCNA_00958	0.40	+0.6
1,036,491	-		CCNA_00958	0.40	+1.2
1,036,491	-		CCNA_00958	0.40	+0.4
1,036,538	+		CCNA_00958	0.44	+0.9
1,036,609	+		CCNA_00958	0.49	-2.3
1,036,626	+		CCNA_00958	0.51	+2.0
1,036,639	+		CCNA_00958	0.52	-0.1
1,036,671	+		CCNA_00958	0.54	-1.2
1,036,679	-		CCNA_00958	0.55	-0.3
1,036,679	-		CCNA_00958	0.55	+0.3
1,036,681	-		CCNA_00958	0.55	+1.2
1,036,719	-		CCNA_00958	0.58	-0.6
1,036,772	-		CCNA_00958	0.62	-1.0
1,036,781	+		CCNA_00958	0.62	-1.3
1,036,786	+		CCNA_00958	0.63	-1.4
1,036,789	-		CCNA_00958	0.63	-0.8
1,036,793	+		CCNA_00958	0.63	-1.4
1,036,793	+		CCNA_00958	0.63	+1.6
1,036,796	-		CCNA_00958	0.63	-1.0
1,036,811	-		CCNA_00958	0.65	-0.4
1,036,882	+		CCNA_00958	0.70	+1.3
1,036,888	+		CCNA_00958	0.70	+1.6
1,036,891	-		CCNA_00958	0.71	+0.6
1,036,904	+		CCNA_00958	0.72	-1.3
1,036,908	-		CCNA_00958	0.72	+1.4
1,036,912	-		CCNA_00958	0.72	+2.0
1,036,970	+		CCNA_00958	0.77	-1.7
1,037,026	+		CCNA_00958	0.81	-1.6
1,037,034	-		CCNA_00958	0.81	+0.6
1,037,088	+		CCNA_00958	0.86	-1.6
1,037,088	+		CCNA_00958	0.86	-0.3
1,037,088	+		CCNA_00958	0.86	+0.0
1,037,088	-		CCNA_00958	0.86	-0.4
1,037,094	+		CCNA_00958	0.86	-1.2
1,037,096	-		CCNA_00958	0.86	+0.8
1,037,096	-		CCNA_00958	0.86	+0.0
1,037,102	-		CCNA_00958	0.87	-1.1
1,037,102	-		CCNA_00958	0.87	+0.8
1,037,102	-		CCNA_00958	0.87	-0.1
1,037,107	-		CCNA_00958	0.87	-0.1
1,037,120	+		CCNA_00958	0.88	-0.7
1,037,124	+		CCNA_00958	0.88	+1.6
1,037,132	-		CCNA_00958	0.89	+2.2
1,037,138	-		CCNA_00958	0.89	-2.2
1,037,149	-				+3.2
1,037,149	-				-1.0
1,037,165	-				+0.6
1,037,205	+				+0.3
1,037,215	+				+0.7
1,037,215	+				+0.0
1,037,245	+				-1.5
1,037,259	-				+0.0
1,037,261	+				-0.4
1,037,269	-				-1.6
1,037,271	+				+1.6
1,037,271	+				-0.8
1,037,284	+				-0.2
1,037,304	+				-0.5
1,037,305	+				+0.0
1,037,323	+				-1.8
1,037,325	-				-0.4
1,037,372	+				+0.1
1,037,380	-				-1.4
1,037,507	+		CCNA_00959	0.16	+0.4
1,037,514	+		CCNA_00959	0.18	+0.0
1,037,515	-		CCNA_00959	0.18	-0.7
1,037,515	-		CCNA_00959	0.18	-1.0
1,037,521	+		CCNA_00959	0.19	-1.0
1,037,521	+		CCNA_00959	0.19	-0.9
1,037,529	-		CCNA_00959	0.20	-2.2
1,037,529	-		CCNA_00959	0.20	-0.4
1,037,537	+		CCNA_00959	0.21	+0.8
1,037,550	-		CCNA_00959	0.23	-2.0
1,037,564	-		CCNA_00959	0.25	-2.1
1,037,597	+		CCNA_00959	0.31	+1.0
1,037,660	+		CCNA_00959	0.40	+0.0
1,037,666	-		CCNA_00959	0.41	-1.3
1,037,668	-		CCNA_00959	0.42	-1.2
1,037,668	-		CCNA_00959	0.42	-1.3
1,037,668	-		CCNA_00959	0.42	-2.4
1,037,673	-		CCNA_00959	0.42	-1.1
1,037,673	-		CCNA_00959	0.42	+0.6
1,037,683	-		CCNA_00959	0.44	-0.9
1,037,684	+		CCNA_00959	0.44	-1.4
1,037,714	-		CCNA_00959	0.49	-0.6
1,037,821	+		CCNA_00959	0.66	+0.2
1,037,830	-		CCNA_00959	0.67	-1.1
1,037,856	+		CCNA_00959	0.71	-0.8
1,037,861	+		CCNA_00959	0.72	+1.2
1,037,861	+		CCNA_00959	0.72	-0.6
1,037,861	+		CCNA_00959	0.72	+0.9
1,037,863	-		CCNA_00959	0.72	+1.6
1,037,869	-		CCNA_00959	0.73	+0.2
1,037,869	-		CCNA_00959	0.73	-0.3
1,037,869	-		CCNA_00959	0.73	-0.1
1,037,878	+		CCNA_00959	0.74	-2.5
1,037,895	-		CCNA_00959	0.77	+0.6
1,037,910	-		CCNA_00959	0.79	+0.4
1,037,910	-		CCNA_00959	0.79	-0.3
1,037,953	-		CCNA_00959	0.86	-1.5
1,037,959	+		CCNA_00959	0.87	+0.4
1,037,975	-		CCNA_00959	0.90	-0.4
1,038,000	+				+0.0
1,038,013	+				-1.7
1,038,023	-				+1.6
1,038,112	-				-1.6
1,038,115	+				+0.0
1,038,128	+		CCNA_00961	0.13	-2.3
1,038,136	-		CCNA_00961	0.15	-0.2
1,038,195	+		CCNA_00961	0.30	+0.7
1,038,195	+		CCNA_00961	0.30	+1.6
1,038,203	-		CCNA_00961	0.32	-0.9
1,038,203	-		CCNA_00961	0.32	-0.7
1,038,203	-		CCNA_00961	0.32	-1.4
1,038,248	-		CCNA_00961	0.43	-1.1
1,038,269	+		CCNA_00961	0.48	+0.8
1,038,290	-		CCNA_00961	0.53	-1.0
1,038,310	-		CCNA_00961	0.58	-1.3
1,038,338	+		CCNA_00961	0.65	+1.6
1,038,338	+		CCNA_00961	0.65	+0.5
1,038,359	+		CCNA_00961	0.70	+0.9
1,038,359	+		CCNA_00961	0.70	-1.2
1,038,450	+				+0.9
1,038,471	+				+0.5
1,038,525	-		CCNA_00962	0.10	+1.3
1,038,684	-		CCNA_00962	0.46	+1.5
1,038,780	-		CCNA_00962	0.67	+1.7
1,038,797	-		CCNA_00962	0.71	+1.3
1,038,797	-		CCNA_00962	0.71	+1.5
1,038,797	-		CCNA_00962	0.71	+1.2
1,038,797	-		CCNA_00962	0.71	+1.6
1,038,802	-		CCNA_00962	0.72	+0.0
1,038,802	-		CCNA_00962	0.72	+1.1
1,038,802	-		CCNA_00962	0.72	+1.4
1,038,802	-		CCNA_00962	0.72	+1.7
1,038,859	+		CCNA_00962	0.85	-0.7
1,038,862	-		CCNA_00962	0.85	+1.7
1,038,990	+		CCNA_00963	0.13	-2.4
1,038,995	+		CCNA_00963	0.14	-0.8
1,038,998	-		CCNA_00963	0.15	+0.0
1,039,002	-		CCNA_00963	0.16	+1.3
1,039,026	-		CCNA_00963	0.21	-0.1
1,039,039	-		CCNA_00963	0.24	+1.6