Strain Fitness in Shewanella loihica PV-4 around Shew_3564

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,254,934	+				+0.2
4,254,964	-				+0.1
4,255,201	+		Shew_3563	0.18	+0.2
4,255,335	-		Shew_3563	0.34	+0.1
4,255,490	+		Shew_3563	0.52	+0.2
4,255,517	-		Shew_3563	0.55	+0.0
4,255,584	-		Shew_3563	0.63	+1.2
4,255,630	-		Shew_3563	0.68	+0.1
4,255,756	+		Shew_3563	0.83	+0.4
4,255,806	-		Shew_3563	0.89	+0.2
4,256,015	-				-0.1
4,256,051	+		Shew_3564	0.11	-0.1
4,256,051	+		Shew_3564	0.11	+0.2
4,256,059	-		Shew_3564	0.11	-0.4
4,256,059	-		Shew_3564	0.11	+0.1
4,256,059	-		Shew_3564	0.11	+0.1
4,256,087	-		Shew_3564	0.14	+0.1
4,256,192	-		Shew_3564	0.22	-0.4
4,256,546	-		Shew_3564	0.49	-0.1
4,256,627	+		Shew_3564	0.56	-0.3
4,256,627	+		Shew_3564	0.56	-0.3
4,256,627	+		Shew_3564	0.56	-0.0
4,256,627	+		Shew_3564	0.56	-0.9
4,256,702	+		Shew_3564	0.61	-1.2
4,256,932	+		Shew_3564	0.79	+0.2
4,256,962	-		Shew_3564	0.82	-0.0
4,257,012	+		Shew_3564	0.85	-0.0
4,257,090	+				+0.1
4,257,090	+				+0.1
4,257,098	-				-0.1
4,257,285	+				-0.2
4,257,310	+				-0.0
4,257,397	-				+0.0
4,257,505	-				+0.5
4,257,633	-		Shew_3565	0.12	-0.2
4,257,953	-		Shew_3565	0.22	-0.4
4,258,035	+		Shew_3565	0.25	-0.3
4,258,146	-		Shew_3565	0.28	-0.1