Strain Fitness in Shewanella loihica PV-4 around Shew_3507

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,192,940	+		Shew_3505	0.85	+0.0
4,193,188	+		Shew_3506	0.12	+0.0
4,193,196	-		Shew_3506	0.14	-0.1
4,193,196	-		Shew_3506	0.14	+0.1
4,193,231	-		Shew_3506	0.19	-0.1
4,193,717	+				+0.1
4,193,954	-				-0.8
4,194,121	+		Shew_3507	0.13	+1.1
4,194,129	-		Shew_3507	0.13	-1.1
4,194,129	-		Shew_3507	0.13	-0.2
4,194,271	+		Shew_3507	0.20	-0.6
4,194,283	+		Shew_3507	0.21	-1.0
4,194,563	+		Shew_3507	0.34	-0.6
4,194,647	-		Shew_3507	0.38	-0.7
4,194,807	-		Shew_3507	0.46	+2.3
4,194,911	+		Shew_3507	0.51	-1.1
4,194,911	+		Shew_3507	0.51	-0.4
4,195,135	+		Shew_3507	0.62	-0.7
4,195,150	+		Shew_3507	0.62	-0.9
4,195,887	+				-1.1
4,195,934	-				-0.1
4,195,934	-				+0.1
4,195,978	-				-0.2
4,196,218	+		Shew_3508	0.18	-0.5
4,196,268	+		Shew_3508	0.24	-0.0
4,196,530	+		Shew_3508	0.54	+0.2
4,196,587	+		Shew_3508	0.61	+0.0
4,196,669	+		Shew_3508	0.70	-0.0