Strain Fitness in Shewanella loihica PV-4 around Shew_3021

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,585,950	-				-0.5
3,586,045	-				+0.3
3,586,338	+		Shew_3020	0.11	-0.2
3,586,396	+		Shew_3020	0.22	-0.2
3,586,399	-		Shew_3020	0.23	-0.1
3,586,420	+		Shew_3020	0.27	+0.6
3,586,428	-		Shew_3020	0.28	+0.1
3,586,428	-		Shew_3020	0.28	-0.1
3,586,532	-		Shew_3020	0.48	+0.0
3,586,640	-		Shew_3020	0.68	+1.0
3,586,832	+				+1.2
3,586,832	+				+0.7
3,586,832	+				+0.6
3,587,030	+				+0.9
3,587,177	-		Shew_3021	0.18	+0.0
3,587,254	+		Shew_3021	0.23	-1.4
3,587,485	-		Shew_3021	0.37	-0.2
3,587,641	+		Shew_3021	0.46	-0.3
3,587,734	+		Shew_3021	0.52	-0.5
3,587,820	-		Shew_3021	0.57	-0.3
3,587,958	+		Shew_3021	0.65	-0.7
3,587,983	-		Shew_3021	0.67	-0.0
3,588,317	+		Shew_3021	0.87	-1.0
3,588,582	+				+0.3
3,588,582	+				-0.0
3,588,590	-				+0.5
3,588,890	+		Shew_3022	0.14	+0.6
3,588,983	+		Shew_3022	0.28	+0.0
3,589,079	-		Shew_3022	0.42	+0.5
3,589,322	+		Shew_3022	0.78	+0.1
3,589,322	+		Shew_3022	0.78	+0.2
3,589,401	+		Shew_3022	0.89	+1.3
3,589,522	-				+0.3
3,589,522	-				-0.2