Strain Fitness in Shewanella loihica PV-4 around Shew_1111

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,279,204	+		Shew_1109	0.62	+0.3
1,279,210	+		Shew_1109	0.63	+0.2
1,279,212	-		Shew_1109	0.63	+0.6
1,279,218	-		Shew_1109	0.65	+0.1
1,279,295	-		Shew_1109	0.80	-0.4
1,279,301	-		Shew_1109	0.81	+0.3
1,279,301	-		Shew_1109	0.81	-0.4
1,279,334	+		Shew_1109	0.87	+0.4
1,279,334	+		Shew_1109	0.87	-0.1
1,279,334	+		Shew_1109	0.87	+0.3
1,279,342	-		Shew_1109	0.89	-0.2
1,279,342	-		Shew_1109	0.89	-0.1
1,279,344	+		Shew_1109	0.89	-0.0
1,279,407	-				-0.2
1,279,414	-				+0.2
1,279,414	+				+0.7
1,279,424	-				-0.1
1,279,428	-				+0.3
1,279,428	-				-0.0
1,279,428	-				-0.2
1,279,434	+				-0.1
1,279,444	+				+0.0
1,279,447	-				-0.2
1,279,472	+				-0.6
1,279,480	-				+0.2
1,279,480	-				+0.2
1,279,480	-				-0.5
1,279,480	-				-0.2
1,279,480	-				+0.1
1,279,491	+				+0.0
1,279,517	-				-1.2
1,279,517	-				+0.1
1,279,590	-				+0.2
1,279,666	-				+0.1
1,279,677	-				+0.1
1,279,702	+		Shew_1110	0.15	+0.2
1,279,789	-		Shew_1110	0.41	+0.5
1,279,906	-		Shew_1110	0.76	-0.0
1,280,137	+				+0.1
1,280,225	+		Shew_1111	0.15	+2.7
1,280,233	-		Shew_1111	0.16	-0.2
1,280,235	+		Shew_1111	0.16	+1.1
1,280,382	-		Shew_1111	0.30	+0.1
1,280,408	-		Shew_1111	0.33	+1.2
1,280,568	+		Shew_1111	0.49	+0.8
1,280,577	+		Shew_1111	0.49	+0.3
1,280,609	+		Shew_1111	0.53	+0.2
1,280,642	-		Shew_1111	0.56	+0.0
1,281,128	-				+0.2
1,281,128	-				+0.2
1,281,128	-				+0.2
1,281,128	-				+0.2
1,281,722	-				-0.7
1,281,969	+		Shew_1112	0.18	-0.0