Experiment: MoLS4 with L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt corA and DVU2436 are separated by 305 nucleotides DVU2436 and DVU2437 are separated by 77 nucleotides
DVU2435: corA - transporter, CorA family (TIGR), at 2,539,141 to 2,540,088
corA
DVU2436: DVU2436 - conserved hypothetical protein (TIGR), at 2,540,394 to 2,541,026
DVU2436
DVU2437: DVU2437 - ABC transporter, permease protein (TIGR), at 2,541,104 to 2,542,324
DVU2437
Position (kb)
2540
2541
2542 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2539.416 kb on + strand, within corA at 2539.470 kb on + strand, within corA at 2539.486 kb on + strand, within corA at 2539.494 kb on - strand, within corA at 2539.519 kb on - strand, within corA at 2539.609 kb on - strand, within corA at 2539.611 kb on + strand, within corA at 2539.619 kb on + strand, within corA at 2539.729 kb on + strand, within corA at 2539.803 kb on + strand, within corA at 2539.811 kb on - strand, within corA at 2539.820 kb on + strand, within corA at 2539.873 kb on - strand, within corA at 2540.025 kb on - strand at 2540.060 kb on - strand at 2540.279 kb on - strand at 2540.338 kb on + strand at 2540.338 kb on + strand at 2540.346 kb on - strand at 2540.346 kb on - strand at 2540.386 kb on - strand at 2540.392 kb on + strand at 2540.480 kb on - strand, within DVU2436 at 2540.528 kb on - strand, within DVU2436 at 2540.556 kb on + strand, within DVU2436 at 2540.732 kb on - strand, within DVU2436 at 2540.813 kb on - strand, within DVU2436 at 2540.910 kb on + strand, within DVU2436 at 2540.966 kb on - strand at 2540.986 kb on - strand at 2541.106 kb on + strand at 2541.167 kb on - strand at 2541.230 kb on + strand, within DVU2437 at 2541.239 kb on - strand, within DVU2437 at 2541.291 kb on - strand, within DVU2437 at 2541.318 kb on + strand, within DVU2437 at 2541.326 kb on - strand, within DVU2437 at 2541.377 kb on + strand, within DVU2437 at 2541.385 kb on - strand, within DVU2437 at 2541.388 kb on + strand, within DVU2437 at 2541.388 kb on + strand, within DVU2437 at 2541.392 kb on - strand, within DVU2437 at 2541.396 kb on - strand, within DVU2437 at 2541.446 kb on - strand, within DVU2437 at 2541.493 kb on + strand, within DVU2437 at 2541.522 kb on - strand, within DVU2437 at 2541.713 kb on - strand, within DVU2437 at 2541.748 kb on - strand, within DVU2437 at 2541.770 kb on + strand, within DVU2437 at 2541.806 kb on + strand, within DVU2437 at 2541.927 kb on + strand, within DVU2437 at 2541.927 kb on + strand, within DVU2437 at 2541.935 kb on - strand, within DVU2437 at 2542.018 kb on + strand, within DVU2437
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glutamine (N) remove 2,539,416 + corA DVU2435 0.29 +0.2 2,539,470 + corA DVU2435 0.35 +0.5 2,539,486 + corA DVU2435 0.36 +0.2 2,539,494 - corA DVU2435 0.37 -0.1 2,539,519 - corA DVU2435 0.40 +0.1 2,539,609 - corA DVU2435 0.49 -0.7 2,539,611 + corA DVU2435 0.50 -0.2 2,539,619 + corA DVU2435 0.50 -0.8 2,539,729 + corA DVU2435 0.62 -0.8 2,539,803 + corA DVU2435 0.70 +0.2 2,539,811 - corA DVU2435 0.71 -0.1 2,539,820 + corA DVU2435 0.72 +0.2 2,539,873 - corA DVU2435 0.77 -0.6 2,540,025 - -0.9 2,540,060 - +0.9 2,540,279 - -0.2 2,540,338 + -0.2 2,540,338 + -0.0 2,540,346 - -0.3 2,540,346 - -0.3 2,540,386 - -0.2 2,540,392 + -0.1 2,540,480 - DVU2436 0.14 -0.3 2,540,528 - DVU2436 0.21 +0.1 2,540,556 + DVU2436 0.26 +0.7 2,540,732 - DVU2436 0.53 -2.6 2,540,813 - DVU2436 0.66 -4.0 2,540,910 + DVU2436 0.82 +0.1 2,540,966 - -1.1 2,540,986 - -0.8 2,541,106 + -0.1 2,541,167 - +0.5 2,541,230 + DVU2437 0.10 -2.6 2,541,239 - DVU2437 0.11 +0.1 2,541,291 - DVU2437 0.15 -0.4 2,541,318 + DVU2437 0.18 -0.6 2,541,326 - DVU2437 0.18 +0.2 2,541,377 + DVU2437 0.22 +1.0 2,541,385 - DVU2437 0.23 +1.0 2,541,388 + DVU2437 0.23 -0.6 2,541,388 + DVU2437 0.23 -1.6 2,541,392 - DVU2437 0.24 +0.3 2,541,396 - DVU2437 0.24 +0.0 2,541,446 - DVU2437 0.28 +0.3 2,541,493 + DVU2437 0.32 +0.0 2,541,522 - DVU2437 0.34 +0.7 2,541,713 - DVU2437 0.50 -0.8 2,541,748 - DVU2437 0.53 -0.1 2,541,770 + DVU2437 0.55 -0.3 2,541,806 + DVU2437 0.57 -2.0 2,541,927 + DVU2437 0.67 +0.5 2,541,927 + DVU2437 0.67 +0.6 2,541,935 - DVU2437 0.68 +0.6 2,542,018 + DVU2437 0.75 -3.0
Or see this region's nucleotide sequence