Experiment: MoLS4 with L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DORF41366 and ntrC1 are separated by 246 nucleotides ntrC1 and DVU2395 are separated by 5 nucleotides
DORF41366: DORF41366 - SEED: FIG00607184: hypothetical protein, at 2,494,623 to 2,496,719
DORF41366
DVU2394: ntrC1 - sigma-54 dependent transcriptional regulator/response regulator (TIGR), at 2,496,966 to 2,498,357
ntrC1
DVU2395: DVU2395 - sensor histidine kinase (TIGR), at 2,498,363 to 2,499,619
DVU2395
Position (kb)
2496
2497
2498
2499 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 2496.041 kb on + strand, within DORF41366 at 2496.049 kb on - strand, within DORF41366 at 2496.056 kb on + strand, within DORF41366 at 2496.090 kb on - strand, within DORF41366 at 2496.126 kb on + strand, within DORF41366 at 2496.201 kb on - strand, within DORF41366 at 2496.468 kb on - strand, within DORF41366 at 2496.550 kb on + strand at 2496.584 kb on - strand at 2496.596 kb on + strand at 2496.642 kb on + strand at 2496.642 kb on + strand at 2496.650 kb on - strand at 2496.698 kb on - strand at 2496.757 kb on + strand at 2496.786 kb on - strand at 2496.786 kb on - strand at 2496.822 kb on + strand at 2496.910 kb on - strand at 2497.077 kb on + strand at 2497.143 kb on + strand, within ntrC1 at 2497.319 kb on - strand, within ntrC1 at 2497.414 kb on - strand, within ntrC1 at 2497.449 kb on + strand, within ntrC1 at 2497.449 kb on + strand, within ntrC1 at 2497.457 kb on - strand, within ntrC1 at 2497.594 kb on - strand, within ntrC1 at 2497.658 kb on + strand, within ntrC1 at 2497.728 kb on + strand, within ntrC1 at 2497.736 kb on - strand, within ntrC1 at 2497.736 kb on - strand, within ntrC1 at 2497.826 kb on - strand, within ntrC1 at 2497.933 kb on - strand, within ntrC1 at 2498.223 kb on + strand at 2498.341 kb on + strand at 2498.402 kb on + strand at 2498.403 kb on - strand at 2498.500 kb on - strand, within DVU2395 at 2498.570 kb on - strand, within DVU2395 at 2498.595 kb on + strand, within DVU2395 at 2498.790 kb on - strand, within DVU2395 at 2498.828 kb on + strand, within DVU2395 at 2498.951 kb on + strand, within DVU2395 at 2499.000 kb on - strand, within DVU2395 at 2499.000 kb on - strand, within DVU2395 at 2499.080 kb on - strand, within DVU2395 at 2499.099 kb on - strand, within DVU2395 at 2499.102 kb on + strand, within DVU2395 at 2499.141 kb on - strand, within DVU2395 at 2499.290 kb on - strand, within DVU2395 at 2499.335 kb on - strand, within DVU2395 at 2499.341 kb on - strand, within DVU2395
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glutamine (N) remove 2,496,041 + DORF41366 0.68 +0.0 2,496,049 - DORF41366 0.68 -0.1 2,496,056 + DORF41366 0.68 +1.3 2,496,090 - DORF41366 0.70 +1.4 2,496,126 + DORF41366 0.72 +0.5 2,496,201 - DORF41366 0.75 -1.0 2,496,468 - DORF41366 0.88 +1.0 2,496,550 + -0.1 2,496,584 - -0.6 2,496,596 + +0.5 2,496,642 + +0.1 2,496,642 + -0.2 2,496,650 - -2.8 2,496,698 - -0.0 2,496,757 + +0.3 2,496,786 - -0.1 2,496,786 - -0.1 2,496,822 + -4.1 2,496,910 - -3.1 2,497,077 + -3.1 2,497,143 + ntrC1 DVU2394 0.13 -2.1 2,497,319 - ntrC1 DVU2394 0.25 -1.7 2,497,414 - ntrC1 DVU2394 0.32 -0.1 2,497,449 + ntrC1 DVU2394 0.35 +0.6 2,497,449 + ntrC1 DVU2394 0.35 -1.0 2,497,457 - ntrC1 DVU2394 0.35 +0.3 2,497,594 - ntrC1 DVU2394 0.45 -5.2 2,497,658 + ntrC1 DVU2394 0.50 -3.2 2,497,728 + ntrC1 DVU2394 0.55 -2.5 2,497,736 - ntrC1 DVU2394 0.55 -0.5 2,497,736 - ntrC1 DVU2394 0.55 -0.1 2,497,826 - ntrC1 DVU2394 0.62 +0.3 2,497,933 - ntrC1 DVU2394 0.69 -0.0 2,498,223 + +0.7 2,498,341 + +0.3 2,498,402 + +1.2 2,498,403 - -2.9 2,498,500 - DVU2395 0.11 +0.8 2,498,570 - DVU2395 0.16 -3.4 2,498,595 + DVU2395 0.18 -1.0 2,498,790 - DVU2395 0.34 -1.2 2,498,828 + DVU2395 0.37 -0.7 2,498,951 + DVU2395 0.47 -3.1 2,499,000 - DVU2395 0.51 -0.1 2,499,000 - DVU2395 0.51 +0.8 2,499,080 - DVU2395 0.57 +1.3 2,499,099 - DVU2395 0.59 +0.1 2,499,102 + DVU2395 0.59 -1.3 2,499,141 - DVU2395 0.62 +0.7 2,499,290 - DVU2395 0.74 +0.7 2,499,335 - DVU2395 0.77 -2.9 2,499,341 - DVU2395 0.78 +2.2
Or see this region's nucleotide sequence