Experiment: MoLS4 with L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1968 and DVU1969 are separated by 13 nucleotides DVU1969 and DVU1970 are separated by 8 nucleotides DVU1970 and DORF14650 are separated by 72 nucleotides DORF14650 and DVU1971 are separated by 242 nucleotides
DVU1968: DVU1968 - oxidoreductase, putative (TIGR), at 2,043,063 to 2,044,304
DVU1968
DVU1969: DVU1969 - hypothetical protein (TIGR), at 2,044,318 to 2,045,013
DVU1969
DVU1970: DVU1970 - response regulator (TIGR), at 2,045,022 to 2,045,429
DVU1970
DORF14650: DORF14650 - no description, at 2,045,502 to 2,045,651
DORF14650
DVU1971: DVU1971 - conserved domain protein (TIGR), at 2,045,894 to 2,046,457
DVU1971
Position (kb)
2045
2046 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2044.054 kb on + strand, within DVU1968 at 2044.054 kb on + strand, within DVU1968 at 2044.088 kb on - strand, within DVU1968 at 2044.141 kb on + strand, within DVU1968 at 2044.165 kb on + strand, within DVU1968 at 2044.181 kb on + strand at 2044.216 kb on - strand at 2044.219 kb on + strand at 2044.221 kb on - strand at 2044.221 kb on - strand at 2044.221 kb on - strand at 2044.442 kb on + strand, within DVU1969 at 2044.481 kb on + strand, within DVU1969 at 2044.511 kb on - strand, within DVU1969 at 2044.548 kb on + strand, within DVU1969 at 2044.574 kb on + strand, within DVU1969 at 2044.609 kb on + strand, within DVU1969 at 2044.683 kb on + strand, within DVU1969 at 2044.721 kb on + strand, within DVU1969 at 2044.756 kb on + strand, within DVU1969 at 2044.806 kb on - strand, within DVU1969 at 2044.806 kb on - strand, within DVU1969 at 2044.861 kb on - strand, within DVU1969 at 2044.956 kb on + strand at 2044.956 kb on + strand at 2044.964 kb on - strand at 2045.008 kb on + strand at 2045.082 kb on + strand, within DVU1970 at 2045.181 kb on + strand, within DVU1970 at 2045.339 kb on - strand, within DVU1970 at 2045.339 kb on - strand, within DVU1970 at 2045.351 kb on + strand, within DVU1970 at 2045.351 kb on + strand, within DVU1970 at 2045.351 kb on + strand, within DVU1970 at 2045.357 kb on - strand, within DVU1970 at 2045.357 kb on - strand, within DVU1970 at 2045.369 kb on - strand, within DVU1970 at 2045.369 kb on - strand, within DVU1970 at 2045.373 kb on + strand, within DVU1970 at 2045.399 kb on + strand at 2045.444 kb on + strand at 2045.525 kb on + strand, within DORF14650 at 2045.601 kb on - strand, within DORF14650 at 2045.626 kb on + strand, within DORF14650 at 2045.644 kb on - strand at 2045.655 kb on - strand at 2045.655 kb on - strand at 2045.689 kb on + strand at 2045.757 kb on + strand at 2045.764 kb on + strand at 2045.796 kb on + strand at 2045.804 kb on + strand at 2045.811 kb on - strand at 2045.867 kb on - strand at 2045.990 kb on - strand, within DVU1971 at 2046.140 kb on + strand, within DVU1971 at 2046.148 kb on - strand, within DVU1971 at 2046.148 kb on - strand, within DVU1971 at 2046.199 kb on + strand, within DVU1971 at 2046.240 kb on + strand, within DVU1971 at 2046.240 kb on + strand, within DVU1971 at 2046.248 kb on - strand, within DVU1971 at 2046.354 kb on + strand, within DVU1971 at 2046.389 kb on + strand, within DVU1971 at 2046.428 kb on - strand at 2046.428 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glutamine (N) remove 2,044,054 + DVU1968 0.80 -3.0 2,044,054 + DVU1968 0.80 +0.6 2,044,088 - DVU1968 0.83 -1.5 2,044,141 + DVU1968 0.87 -0.4 2,044,165 + DVU1968 0.89 -3.0 2,044,181 + +0.1 2,044,216 - +0.0 2,044,219 + -4.0 2,044,221 - +0.7 2,044,221 - -0.5 2,044,221 - -3.0 2,044,442 + DVU1969 0.18 -0.2 2,044,481 + DVU1969 0.23 -0.2 2,044,511 - DVU1969 0.28 -0.1 2,044,548 + DVU1969 0.33 -0.1 2,044,574 + DVU1969 0.37 +0.0 2,044,609 + DVU1969 0.42 +0.9 2,044,683 + DVU1969 0.52 -0.2 2,044,721 + DVU1969 0.58 -1.6 2,044,756 + DVU1969 0.63 +0.8 2,044,806 - DVU1969 0.70 -0.5 2,044,806 - DVU1969 0.70 +0.0 2,044,861 - DVU1969 0.78 -0.2 2,044,956 + -0.2 2,044,956 + -0.2 2,044,964 - +0.0 2,045,008 + -2.6 2,045,082 + DVU1970 0.15 +0.7 2,045,181 + DVU1970 0.39 -0.2 2,045,339 - DVU1970 0.78 -2.7 2,045,339 - DVU1970 0.78 -0.3 2,045,351 + DVU1970 0.81 +0.0 2,045,351 + DVU1970 0.81 +0.2 2,045,351 + DVU1970 0.81 +1.0 2,045,357 - DVU1970 0.82 -0.2 2,045,357 - DVU1970 0.82 -0.3 2,045,369 - DVU1970 0.85 -0.5 2,045,369 - DVU1970 0.85 +0.0 2,045,373 + DVU1970 0.86 +0.5 2,045,399 + -0.0 2,045,444 + +0.3 2,045,525 + DORF14650 0.15 +0.4 2,045,601 - DORF14650 0.66 -1.2 2,045,626 + DORF14650 0.83 +0.1 2,045,644 - +0.4 2,045,655 - -3.0 2,045,655 - -0.2 2,045,689 + -2.7 2,045,757 + -0.0 2,045,764 + -0.2 2,045,796 + -0.4 2,045,804 + +0.1 2,045,811 - -3.2 2,045,867 - -0.2 2,045,990 - DVU1971 0.17 -2.8 2,046,140 + DVU1971 0.44 +0.2 2,046,148 - DVU1971 0.45 +1.1 2,046,148 - DVU1971 0.45 -0.1 2,046,199 + DVU1971 0.54 -0.6 2,046,240 + DVU1971 0.61 +0.5 2,046,240 + DVU1971 0.61 +0.3 2,046,248 - DVU1971 0.63 +0.2 2,046,354 + DVU1971 0.82 -0.4 2,046,389 + DVU1971 0.88 -0.5 2,046,428 - -2.8 2,046,428 - -0.1
Or see this region's nucleotide sequence