Experiment: MoLS4 with L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DORF13417 and DORF13424 overlap by 23 nucleotides DORF13424 and DVU1801 are separated by 82 nucleotides DVU1801 and DVU1802 are separated by 209 nucleotides
DORF13417: DORF13417 - SEED: FIG00603341: hypothetical protein, at 1,861,868 to 1,862,878
DORF13417
DORF13424: DORF13424 - no description, at 1,862,856 to 1,862,999
DORF13424
DVU1801: DVU1801 - hypothetical protein (TIGR), at 1,863,082 to 1,864,269
DVU1801
DVU1802: DVU1802 - conserved hypothetical protein (TIGR), at 1,864,479 to 1,865,339
DVU1802
Position (kb)
1863
1864
1865 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1862.909 kb on + strand, within DORF13424 at 1863.070 kb on - strand at 1863.238 kb on - strand, within DVU1801 at 1863.407 kb on - strand, within DVU1801 at 1863.449 kb on + strand, within DVU1801 at 1863.449 kb on + strand, within DVU1801 at 1863.449 kb on + strand, within DVU1801 at 1863.459 kb on + strand, within DVU1801 at 1863.467 kb on - strand, within DVU1801 at 1863.526 kb on - strand, within DVU1801 at 1863.535 kb on - strand, within DVU1801 at 1863.564 kb on + strand, within DVU1801 at 1863.672 kb on - strand, within DVU1801 at 1863.863 kb on - strand, within DVU1801 at 1863.873 kb on + strand, within DVU1801 at 1863.880 kb on + strand, within DVU1801 at 1863.904 kb on - strand, within DVU1801 at 1863.976 kb on + strand, within DVU1801 at 1864.056 kb on - strand, within DVU1801 at 1864.125 kb on - strand, within DVU1801 at 1864.142 kb on - strand, within DVU1801 at 1864.142 kb on - strand, within DVU1801 at 1864.174 kb on - strand at 1864.247 kb on + strand at 1864.311 kb on + strand at 1864.311 kb on - strand at 1864.333 kb on - strand at 1864.427 kb on - strand at 1864.738 kb on + strand, within DVU1802 at 1864.827 kb on + strand, within DVU1802 at 1864.927 kb on - strand, within DVU1802 at 1864.962 kb on + strand, within DVU1802 at 1864.962 kb on + strand, within DVU1802 at 1864.970 kb on - strand, within DVU1802 at 1864.988 kb on + strand, within DVU1802 at 1865.027 kb on + strand, within DVU1802 at 1865.027 kb on + strand, within DVU1802 at 1865.035 kb on - strand, within DVU1802 at 1865.045 kb on - strand, within DVU1802 at 1865.072 kb on - strand, within DVU1802 at 1865.093 kb on + strand, within DVU1802 at 1865.108 kb on + strand, within DVU1802 at 1865.108 kb on + strand, within DVU1802 at 1865.150 kb on - strand, within DVU1802 at 1865.177 kb on + strand, within DVU1802 at 1865.219 kb on + strand, within DVU1802 at 1865.227 kb on - strand, within DVU1802 at 1865.232 kb on + strand, within DVU1802
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glutamine (N) remove 1,862,909 + DORF13424 0.37 +0.2 1,863,070 - -0.0 1,863,238 - DVU1801 0.13 -0.2 1,863,407 - DVU1801 0.27 -0.2 1,863,449 + DVU1801 0.31 +0.2 1,863,449 + DVU1801 0.31 -3.8 1,863,449 + DVU1801 0.31 -0.2 1,863,459 + DVU1801 0.32 -0.6 1,863,467 - DVU1801 0.32 -1.1 1,863,526 - DVU1801 0.37 -3.3 1,863,535 - DVU1801 0.38 -2.4 1,863,564 + DVU1801 0.41 -0.2 1,863,672 - DVU1801 0.50 -2.9 1,863,863 - DVU1801 0.66 -0.0 1,863,873 + DVU1801 0.67 -3.0 1,863,880 + DVU1801 0.67 -3.7 1,863,904 - DVU1801 0.69 -3.1 1,863,976 + DVU1801 0.75 -0.9 1,864,056 - DVU1801 0.82 -0.0 1,864,125 - DVU1801 0.88 -1.9 1,864,142 - DVU1801 0.89 -0.2 1,864,142 - DVU1801 0.89 +0.1 1,864,174 - +0.5 1,864,247 + -3.8 1,864,311 + +1.4 1,864,311 - -2.2 1,864,333 - -0.1 1,864,427 - -0.5 1,864,738 + DVU1802 0.30 +0.6 1,864,827 + DVU1802 0.40 +0.0 1,864,927 - DVU1802 0.52 -2.7 1,864,962 + DVU1802 0.56 -0.3 1,864,962 + DVU1802 0.56 -0.1 1,864,970 - DVU1802 0.57 -0.1 1,864,988 + DVU1802 0.59 -2.8 1,865,027 + DVU1802 0.64 -0.3 1,865,027 + DVU1802 0.64 -2.4 1,865,035 - DVU1802 0.65 -3.5 1,865,045 - DVU1802 0.66 +0.3 1,865,072 - DVU1802 0.69 +0.5 1,865,093 + DVU1802 0.71 +0.6 1,865,108 + DVU1802 0.73 +0.9 1,865,108 + DVU1802 0.73 -0.4 1,865,150 - DVU1802 0.78 +0.7 1,865,177 + DVU1802 0.81 -3.3 1,865,219 + DVU1802 0.86 -0.3 1,865,227 - DVU1802 0.87 +0.3 1,865,232 + DVU1802 0.87 -0.2
Or see this region's nucleotide sequence