Experiment: MoLS4 with L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0993 and DVU0994 are separated by 272 nucleotides DVU0994 and DVU0995 are separated by 239 nucleotides DVU0995 and DVU0996 are separated by 212 nucleotides
DVU0993: DVU0993 - hypothetical protein (TIGR), at 1,087,234 to 1,087,956
DVU0993
DVU0994: DVU0994 - hypothetical protein (TIGR), at 1,088,229 to 1,088,408
DVU0994
DVU0995: DVU0995 - ThiJ/PfpI family protein (TIGR), at 1,088,648 to 1,089,235
DVU0995
DVU0996: DVU0996 - hypothetical protein (TIGR), at 1,089,448 to 1,090,323
DVU0996
Position (kb)
1088
1089
1090 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1087.766 kb on + strand, within DVU0993 at 1087.792 kb on - strand, within DVU0993 at 1087.810 kb on + strand, within DVU0993 at 1087.830 kb on + strand, within DVU0993 at 1087.962 kb on + strand at 1088.141 kb on + strand at 1088.520 kb on + strand at 1088.751 kb on - strand, within DVU0995 at 1088.818 kb on + strand, within DVU0995 at 1088.948 kb on - strand, within DVU0995 at 1088.948 kb on - strand, within DVU0995 at 1089.003 kb on + strand, within DVU0995 at 1089.019 kb on - strand, within DVU0995 at 1089.021 kb on - strand, within DVU0995 at 1089.044 kb on + strand, within DVU0995 at 1089.057 kb on + strand, within DVU0995 at 1089.351 kb on + strand at 1089.380 kb on - strand at 1089.479 kb on + strand at 1089.489 kb on - strand at 1089.538 kb on - strand, within DVU0996 at 1089.571 kb on - strand, within DVU0996 at 1089.583 kb on - strand, within DVU0996 at 1089.588 kb on - strand, within DVU0996 at 1089.624 kb on - strand, within DVU0996 at 1089.711 kb on - strand, within DVU0996 at 1089.711 kb on - strand, within DVU0996 at 1089.720 kb on + strand, within DVU0996 at 1089.781 kb on + strand, within DVU0996 at 1089.838 kb on + strand, within DVU0996 at 1089.846 kb on - strand, within DVU0996 at 1089.853 kb on + strand, within DVU0996 at 1089.859 kb on - strand, within DVU0996 at 1089.864 kb on - strand, within DVU0996 at 1089.903 kb on - strand, within DVU0996 at 1089.918 kb on + strand, within DVU0996 at 1089.926 kb on - strand, within DVU0996 at 1089.926 kb on - strand, within DVU0996 at 1090.010 kb on + strand, within DVU0996 at 1090.031 kb on - strand, within DVU0996 at 1090.032 kb on + strand, within DVU0996 at 1090.071 kb on + strand, within DVU0996 at 1090.097 kb on + strand, within DVU0996 at 1090.126 kb on - strand, within DVU0996
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glutamine (N) remove 1,087,766 + DVU0993 0.74 +0.2 1,087,792 - DVU0993 0.77 +1.0 1,087,810 + DVU0993 0.80 +0.9 1,087,830 + DVU0993 0.82 +1.3 1,087,962 + -0.3 1,088,141 + -3.0 1,088,520 + +1.2 1,088,751 - DVU0995 0.18 +0.2 1,088,818 + DVU0995 0.29 +0.7 1,088,948 - DVU0995 0.51 +0.5 1,088,948 - DVU0995 0.51 +0.7 1,089,003 + DVU0995 0.60 +0.5 1,089,019 - DVU0995 0.63 +0.2 1,089,021 - DVU0995 0.63 -1.7 1,089,044 + DVU0995 0.67 +0.1 1,089,057 + DVU0995 0.70 +1.0 1,089,351 + +0.4 1,089,380 - -0.3 1,089,479 + -0.4 1,089,489 - -0.1 1,089,538 - DVU0996 0.10 -0.1 1,089,571 - DVU0996 0.14 -0.1 1,089,583 - DVU0996 0.15 -0.1 1,089,588 - DVU0996 0.16 -2.6 1,089,624 - DVU0996 0.20 +1.0 1,089,711 - DVU0996 0.30 -0.8 1,089,711 - DVU0996 0.30 -0.4 1,089,720 + DVU0996 0.31 -0.5 1,089,781 + DVU0996 0.38 -0.2 1,089,838 + DVU0996 0.45 -0.5 1,089,846 - DVU0996 0.45 -3.0 1,089,853 + DVU0996 0.46 -2.8 1,089,859 - DVU0996 0.47 -0.1 1,089,864 - DVU0996 0.47 -0.6 1,089,903 - DVU0996 0.52 +0.4 1,089,918 + DVU0996 0.54 -0.1 1,089,926 - DVU0996 0.55 -0.2 1,089,926 - DVU0996 0.55 -0.3 1,090,010 + DVU0996 0.64 -0.3 1,090,031 - DVU0996 0.67 -2.7 1,090,032 + DVU0996 0.67 -0.1 1,090,071 + DVU0996 0.71 -0.3 1,090,097 + DVU0996 0.74 +0.1 1,090,126 - DVU0996 0.77 +0.4
Or see this region's nucleotide sequence