Experiment: MoLS4 with L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt mltA and DVU0888 are separated by 90 nucleotides DVU0888 and DVU0889 are separated by 95 nucleotides
DVU0887: mltA - transglycosylase, putative (TIGR), at 976,825 to 978,099
mltA
DVU0888: DVU0888 - response regulator (TIGR), at 978,190 to 979,902
DVU0888
DVU0889: DVU0889 - phosphonopyruvate decarboxylase-related protein (TIGR), at 979,998 to 981,137
DVU0889
Position (kb)
978
979
980 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 977.233 kb on + strand, within mltA at 977.238 kb on + strand, within mltA at 977.254 kb on + strand, within mltA at 977.340 kb on - strand, within mltA at 977.384 kb on - strand, within mltA at 977.405 kb on + strand, within mltA at 977.419 kb on - strand, within mltA at 977.419 kb on - strand, within mltA at 977.601 kb on + strand, within mltA at 977.639 kb on - strand, within mltA at 977.663 kb on - strand, within mltA at 977.673 kb on - strand, within mltA at 977.751 kb on + strand, within mltA at 977.794 kb on + strand, within mltA at 977.794 kb on + strand, within mltA at 977.817 kb on - strand, within mltA at 977.821 kb on + strand, within mltA at 977.823 kb on + strand, within mltA at 977.869 kb on - strand, within mltA at 977.889 kb on + strand, within mltA at 977.897 kb on - strand, within mltA at 977.955 kb on + strand, within mltA at 977.959 kb on + strand, within mltA at 977.967 kb on - strand, within mltA at 977.976 kb on + strand at 977.984 kb on - strand at 978.023 kb on - strand at 978.023 kb on - strand at 978.036 kb on + strand at 978.070 kb on + strand at 978.075 kb on + strand at 978.128 kb on - strand at 978.144 kb on - strand at 978.144 kb on - strand at 978.144 kb on - strand at 978.283 kb on - strand at 978.315 kb on - strand at 978.315 kb on - strand at 978.354 kb on + strand at 978.359 kb on + strand at 978.367 kb on - strand, within DVU0888 at 978.367 kb on - strand, within DVU0888 at 978.389 kb on - strand, within DVU0888 at 978.486 kb on + strand, within DVU0888 at 978.516 kb on + strand, within DVU0888 at 978.554 kb on + strand, within DVU0888 at 978.744 kb on - strand, within DVU0888 at 978.837 kb on + strand, within DVU0888 at 978.933 kb on + strand, within DVU0888 at 979.046 kb on + strand, within DVU0888 at 979.101 kb on + strand, within DVU0888 at 979.141 kb on - strand, within DVU0888 at 979.146 kb on + strand, within DVU0888 at 979.154 kb on - strand, within DVU0888 at 979.311 kb on + strand, within DVU0888 at 979.378 kb on - strand, within DVU0888 at 979.411 kb on - strand, within DVU0888 at 979.411 kb on - strand, within DVU0888 at 979.594 kb on - strand, within DVU0888 at 979.773 kb on - strand at 979.835 kb on - strand at 979.905 kb on - strand at 979.905 kb on - strand at 980.024 kb on - strand at 980.057 kb on + strand at 980.101 kb on - strand at 980.145 kb on - strand, within DVU0889 at 980.179 kb on + strand, within DVU0889 at 980.202 kb on - strand, within DVU0889 at 980.299 kb on - strand, within DVU0889 at 980.330 kb on - strand, within DVU0889 at 980.340 kb on + strand, within DVU0889 at 980.348 kb on - strand, within DVU0889 at 980.429 kb on + strand, within DVU0889 at 980.431 kb on - strand, within DVU0889 at 980.437 kb on - strand, within DVU0889 at 980.463 kb on - strand, within DVU0889 at 980.512 kb on - strand, within DVU0889 at 980.524 kb on + strand, within DVU0889 at 980.524 kb on + strand, within DVU0889 at 980.577 kb on - strand, within DVU0889 at 980.592 kb on + strand, within DVU0889 at 980.613 kb on + strand, within DVU0889 at 980.705 kb on + strand, within DVU0889 at 980.731 kb on + strand, within DVU0889 at 980.731 kb on + strand, within DVU0889 at 980.738 kb on - strand, within DVU0889 at 980.739 kb on - strand, within DVU0889
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glutamine (N) remove 977,233 + mltA DVU0887 0.32 +0.4 977,238 + mltA DVU0887 0.32 -0.6 977,254 + mltA DVU0887 0.34 +0.1 977,340 - mltA DVU0887 0.40 -0.4 977,384 - mltA DVU0887 0.44 -0.2 977,405 + mltA DVU0887 0.45 -3.2 977,419 - mltA DVU0887 0.47 -3.6 977,419 - mltA DVU0887 0.47 -0.3 977,601 + mltA DVU0887 0.61 -0.4 977,639 - mltA DVU0887 0.64 -0.1 977,663 - mltA DVU0887 0.66 +1.2 977,673 - mltA DVU0887 0.67 -0.2 977,751 + mltA DVU0887 0.73 -0.5 977,794 + mltA DVU0887 0.76 -0.1 977,794 + mltA DVU0887 0.76 -0.2 977,817 - mltA DVU0887 0.78 +0.7 977,821 + mltA DVU0887 0.78 +0.1 977,823 + mltA DVU0887 0.78 +0.3 977,869 - mltA DVU0887 0.82 +0.8 977,889 + mltA DVU0887 0.83 -2.8 977,897 - mltA DVU0887 0.84 -0.3 977,955 + mltA DVU0887 0.89 -0.2 977,959 + mltA DVU0887 0.89 +0.1 977,967 - mltA DVU0887 0.90 -1.3 977,976 + +0.1 977,984 - -0.0 978,023 - +0.7 978,023 - -0.1 978,036 + +2.0 978,070 + -0.2 978,075 + -0.1 978,128 - -0.4 978,144 - -3.1 978,144 - -2.5 978,144 - -0.4 978,283 - +0.2 978,315 - -0.1 978,315 - -0.6 978,354 + -0.2 978,359 + +0.0 978,367 - DVU0888 0.10 -2.5 978,367 - DVU0888 0.10 +0.1 978,389 - DVU0888 0.12 -0.3 978,486 + DVU0888 0.17 -1.4 978,516 + DVU0888 0.19 -2.3 978,554 + DVU0888 0.21 -0.9 978,744 - DVU0888 0.32 -2.5 978,837 + DVU0888 0.38 -5.6 978,933 + DVU0888 0.43 +0.2 979,046 + DVU0888 0.50 -1.1 979,101 + DVU0888 0.53 -1.1 979,141 - DVU0888 0.56 -0.8 979,146 + DVU0888 0.56 -3.1 979,154 - DVU0888 0.56 -0.4 979,311 + DVU0888 0.65 -1.0 979,378 - DVU0888 0.69 -1.0 979,411 - DVU0888 0.71 -2.4 979,411 - DVU0888 0.71 -1.4 979,594 - DVU0888 0.82 -0.4 979,773 - -0.1 979,835 - +0.6 979,905 - -0.7 979,905 - +0.0 980,024 - -1.1 980,057 + -0.7 980,101 - -0.4 980,145 - DVU0889 0.13 -0.1 980,179 + DVU0889 0.16 -0.6 980,202 - DVU0889 0.18 +0.6 980,299 - DVU0889 0.26 +0.8 980,330 - DVU0889 0.29 -1.0 980,340 + DVU0889 0.30 +0.8 980,348 - DVU0889 0.31 -0.3 980,429 + DVU0889 0.38 +0.1 980,431 - DVU0889 0.38 +0.1 980,437 - DVU0889 0.39 -0.1 980,463 - DVU0889 0.41 +0.1 980,512 - DVU0889 0.45 -0.6 980,524 + DVU0889 0.46 -3.4 980,524 + DVU0889 0.46 -2.2 980,577 - DVU0889 0.51 -0.6 980,592 + DVU0889 0.52 -0.9 980,613 + DVU0889 0.54 -0.3 980,705 + DVU0889 0.62 -0.4 980,731 + DVU0889 0.64 -0.3 980,731 + DVU0889 0.64 -0.2 980,738 - DVU0889 0.65 -0.1 980,739 - DVU0889 0.65 -0.5
Or see this region's nucleotide sequence