Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2406

Experiment: L-Malic Acid (C) with ammonium chloride; high light

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Malic Acid (C) with ammonium chloride; high light
2,801,405	-		Rru_A2405	0.70	-1.3
2,801,656	+		Rru_A2405	0.82	-0.9
2,801,656	+		Rru_A2405	0.82	-1.1
2,801,657	-		Rru_A2405	0.82	-0.1
2,801,657	-		Rru_A2405	0.82	-0.1
2,802,024	-				-0.1
2,802,184	+				-0.1
2,802,184	+				-1.4
2,802,197	+				-0.1
2,802,197	+				-0.1
2,802,198	-				-0.1
2,802,200	+				-0.6
2,802,491	+				-0.1
2,802,491	+				-0.1
2,802,492	-				-0.1
2,802,541	-				-1.0
2,802,659	+				-0.1
2,802,659	+				-2.6
2,802,659	+				-0.3
2,802,659	+				-0.1
2,802,660	-				-0.1
2,802,660	-				-1.7
2,802,660	-				-0.1
2,802,660	-				-0.1
2,802,770	+		Rru_A2406	0.11	-0.1
2,802,783	+		Rru_A2406	0.12	-1.5
2,802,784	-		Rru_A2406	0.12	-2.5
2,802,791	+		Rru_A2406	0.12	-1.2
2,802,792	-		Rru_A2406	0.12	-0.1
2,802,792	-		Rru_A2406	0.12	-0.1
2,802,792	-		Rru_A2406	0.12	-1.1
2,802,792	-		Rru_A2406	0.12	-0.1
2,802,794	+		Rru_A2406	0.12	-1.6
2,802,794	+		Rru_A2406	0.12	-1.4
2,802,794	+		Rru_A2406	0.12	-0.1
2,802,794	+		Rru_A2406	0.12	-0.1
2,802,794	+		Rru_A2406	0.12	-0.1
2,802,794	+		Rru_A2406	0.12	-0.1
2,802,794	+		Rru_A2406	0.12	-1.9
2,802,794	+		Rru_A2406	0.12	-1.1
2,802,794	+		Rru_A2406	0.12	-0.7
2,802,795	-		Rru_A2406	0.12	-0.1
2,803,094	-		Rru_A2406	0.20	-0.1
2,803,094	-		Rru_A2406	0.20	-0.1
2,803,094	-		Rru_A2406	0.20	-0.1
2,803,094	-		Rru_A2406	0.20	-0.2
2,803,153	+		Rru_A2406	0.21	+0.3
2,803,153	+		Rru_A2406	0.21	-0.1
2,803,184	+		Rru_A2406	0.22	-0.1
2,803,184	+		Rru_A2406	0.22	-0.1
2,803,184	+		Rru_A2406	0.22	-0.6
2,803,184	+		Rru_A2406	0.22	-1.8
2,803,185	-		Rru_A2406	0.22	-0.1
2,803,185	-		Rru_A2406	0.22	-0.1
2,803,185	-		Rru_A2406	0.22	-0.1
2,803,185	-		Rru_A2406	0.22	-0.1
2,803,185	-		Rru_A2406	0.22	-0.1
2,803,185	-		Rru_A2406	0.22	-0.1
2,803,185	-		Rru_A2406	0.22	-1.7
2,803,701	-		Rru_A2406	0.35	-1.1
2,803,701	-		Rru_A2406	0.35	-2.3
2,803,701	-		Rru_A2406	0.35	-0.1
2,803,714	+		Rru_A2406	0.35	-0.6
2,803,883	+		Rru_A2406	0.40	-0.1
2,803,884	-		Rru_A2406	0.40	-0.1
2,803,884	-		Rru_A2406	0.40	-1.6
2,804,108	+		Rru_A2406	0.46	-1.5
2,804,108	+		Rru_A2406	0.46	-0.1
2,804,108	+		Rru_A2406	0.46	-0.1
2,804,108	+		Rru_A2406	0.46	-1.8
2,804,109	-		Rru_A2406	0.46	-0.1
2,804,109	-		Rru_A2406	0.46	-0.1
2,804,190	+		Rru_A2406	0.48	-0.1
2,804,190	+		Rru_A2406	0.48	-0.1
2,804,191	-		Rru_A2406	0.48	-0.7
2,804,191	-		Rru_A2406	0.48	-0.1
2,804,191	-		Rru_A2406	0.48	-0.1
2,804,423	+		Rru_A2406	0.54	-0.6
2,804,423	+		Rru_A2406	0.54	-0.1
2,804,423	+		Rru_A2406	0.54	-0.1
2,804,423	+		Rru_A2406	0.54	-0.1
2,804,423	+		Rru_A2406	0.54	-0.1
2,804,423	+		Rru_A2406	0.54	-0.1
2,804,423	+		Rru_A2406	0.54	-0.1
2,804,423	+		Rru_A2406	0.54	-2.9
2,804,423	+		Rru_A2406	0.54	-0.5
2,804,424	-		Rru_A2406	0.54	-1.7
2,804,424	-		Rru_A2406	0.54	+0.4
2,804,424	-		Rru_A2406	0.54	-0.1
2,804,424	-		Rru_A2406	0.54	-0.1
2,804,424	-		Rru_A2406	0.54	-0.1
2,804,424	-		Rru_A2406	0.54	+0.2
2,804,424	-		Rru_A2406	0.54	-0.1
2,804,424	-		Rru_A2406	0.54	-0.1
2,804,424	-		Rru_A2406	0.54	-0.1
2,804,424	-		Rru_A2406	0.54	-1.4
2,804,425	+		Rru_A2406	0.54	-0.1
2,804,425	+		Rru_A2406	0.54	-0.1
2,804,426	-		Rru_A2406	0.54	-1.9
2,804,426	-		Rru_A2406	0.54	-0.1
2,804,426	-		Rru_A2406	0.54	-0.1
2,804,426	-		Rru_A2406	0.54	-0.1
2,804,442	-		Rru_A2406	0.54	-0.1
2,804,519	+		Rru_A2406	0.56	-0.1
2,804,519	+		Rru_A2406	0.56	-1.7
2,804,520	-		Rru_A2406	0.56	-0.1
2,804,681	+		Rru_A2406	0.60	-1.9
2,804,682	-		Rru_A2406	0.60	-0.1
2,804,750	+		Rru_A2406	0.62	-0.1
2,804,750	+		Rru_A2406	0.62	-0.1
2,804,750	+		Rru_A2406	0.62	-2.3
2,804,750	+		Rru_A2406	0.62	-1.1
2,804,751	-		Rru_A2406	0.62	-0.7
2,804,751	-		Rru_A2406	0.62	-0.1
2,804,751	-		Rru_A2406	0.62	-0.1
2,804,888	+		Rru_A2406	0.66	-0.1
2,804,888	+		Rru_A2406	0.66	-0.1
2,804,889	-		Rru_A2406	0.66	-0.1
2,804,889	-		Rru_A2406	0.66	-0.2
2,804,889	-		Rru_A2406	0.66	-0.1
2,805,118	+		Rru_A2406	0.71	-0.1
2,805,118	+		Rru_A2406	0.71	-0.1
2,805,119	-		Rru_A2406	0.71	-0.1
2,805,119	-		Rru_A2406	0.71	-0.4
2,805,119	-		Rru_A2406	0.71	-1.1
2,805,339	+		Rru_A2406	0.77	+0.1
2,805,339	+		Rru_A2406	0.77	-0.1
2,805,339	+		Rru_A2406	0.77	-0.1
2,805,340	-		Rru_A2406	0.77	-2.1
2,805,428	+		Rru_A2406	0.79	-0.1
2,805,429	-		Rru_A2406	0.79	-2.1
2,805,429	-		Rru_A2406	0.79	-1.9
2,805,437	+		Rru_A2406	0.80	-0.1
2,805,530	+		Rru_A2406	0.82	-0.1
2,805,614	-		Rru_A2406	0.84	-0.1
2,805,614	-		Rru_A2406	0.84	-0.1
2,805,631	+		Rru_A2406	0.85	-0.1
2,805,632	-		Rru_A2406	0.85	-0.1
2,805,632	-		Rru_A2406	0.85	-1.0
2,805,632	-		Rru_A2406	0.85	-2.4
2,805,632	-		Rru_A2406	0.85	-0.1
2,805,910	+				-0.1
2,806,175	+				-1.5
2,806,399	+		Rru_A2407	0.11	-1.1
2,806,400	-		Rru_A2407	0.11	-0.1
2,806,400	-		Rru_A2407	0.11	-0.1
2,806,400	-		Rru_A2407	0.11	-0.1
2,806,400	-		Rru_A2407	0.11	-0.1
2,806,400	-		Rru_A2407	0.11	-0.1
2,806,409	-		Rru_A2407	0.12	-1.5
2,806,555	+		Rru_A2407	0.37	-0.1
2,806,556	-		Rru_A2407	0.37	-0.1
2,806,556	-		Rru_A2407	0.37	-1.5
2,806,561	+		Rru_A2407	0.38	-0.1
2,806,561	+		Rru_A2407	0.38	-0.1
2,806,561	+		Rru_A2407	0.38	-0.1
2,806,561	+		Rru_A2407	0.38	-0.1
2,806,561	+		Rru_A2407	0.38	-0.1
2,806,562	-		Rru_A2407	0.38	-1.1
2,806,562	-		Rru_A2407	0.38	-1.1
2,806,618	+		Rru_A2407	0.48	-0.1
2,806,618	+		Rru_A2407	0.48	-0.1
2,806,618	+		Rru_A2407	0.48	-0.1
2,806,618	+		Rru_A2407	0.48	-0.1
2,806,618	+		Rru_A2407	0.48	-2.6
2,806,619	-		Rru_A2407	0.48	-0.1
2,806,627	-		Rru_A2407	0.49	-1.7
2,806,737	+		Rru_A2407	0.68	-0.1
2,806,834	+		Rru_A2407	0.85	-0.1
2,806,834	+		Rru_A2407	0.85	-2.3
2,806,835	-		Rru_A2407	0.85	-1.7
2,806,835	-		Rru_A2407	0.85	-0.1
2,806,835	-		Rru_A2407	0.85	-2.0
2,806,838	-		Rru_A2407	0.85	-2.0
2,806,838	-		Rru_A2407	0.85	-0.1