Strain Fitness in Rhodospirillum rubrum S1H around Rru_B0037

Experiment: L-Malic Acid (C) with ammonium chloride; high light

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Malic Acid (C) with ammonium chloride; high light
34,455	+		Rru_B0036	0.44	-0.2
34,456	-		Rru_B0036	0.44	-2.2
34,512	+		Rru_B0036	0.49	-0.2
34,512	+		Rru_B0036	0.49	-0.2
34,512	+		Rru_B0036	0.49	-0.2
34,512	+		Rru_B0036	0.49	-0.5
34,512	+		Rru_B0036	0.49	-0.2
34,512	+		Rru_B0036	0.49	-0.2
34,512	+		Rru_B0036	0.49	-0.2
34,512	+		Rru_B0036	0.49	-0.2
34,512	+		Rru_B0036	0.49	-0.2
34,512	+		Rru_B0036	0.49	-0.2
34,512	+		Rru_B0036	0.49	-0.2
34,512	+		Rru_B0036	0.49	-0.2
34,512	+		Rru_B0036	0.49	-0.4
34,512	+		Rru_B0036	0.49	-1.2
34,512	+		Rru_B0036	0.49	-1.2
34,512	+		Rru_B0036	0.49	-0.2
34,512	+		Rru_B0036	0.49	-0.2
34,512	+		Rru_B0036	0.49	-1.4
34,512	+		Rru_B0036	0.49	-0.2
34,512	+		Rru_B0036	0.49	+0.3
34,512	+		Rru_B0036	0.49	-0.2
34,513	-		Rru_B0036	0.49	-0.2
34,513	-		Rru_B0036	0.49	-0.2
34,513	-		Rru_B0036	0.49	-1.2
34,513	-		Rru_B0036	0.49	-0.2
34,513	-		Rru_B0036	0.49	-0.2
34,513	-		Rru_B0036	0.49	-0.2
34,513	-		Rru_B0036	0.49	-0.2
34,513	-		Rru_B0036	0.49	-0.2
34,513	-		Rru_B0036	0.49	-1.4
34,513	-		Rru_B0036	0.49	-0.2
34,513	-		Rru_B0036	0.49	-0.2
34,513	-		Rru_B0036	0.49	-1.2
34,513	-		Rru_B0036	0.49	-0.7
34,513	-		Rru_B0036	0.49	-0.2
34,513	-		Rru_B0036	0.49	-0.2
34,513	-		Rru_B0036	0.49	-1.8
34,513	-		Rru_B0036	0.49	-0.2
34,513	-		Rru_B0036	0.49	-0.2
34,513	-		Rru_B0036	0.49	-0.2
34,514	+		Rru_B0036	0.49	-0.6
34,514	+		Rru_B0036	0.49	-0.2
34,514	+		Rru_B0036	0.49	-0.2
34,514	+		Rru_B0036	0.49	-0.2
34,514	+		Rru_B0036	0.49	-1.0
34,514	+		Rru_B0036	0.49	-0.2
34,515	-		Rru_B0036	0.49	-0.2
34,515	-		Rru_B0036	0.49	-0.9
34,515	-		Rru_B0036	0.49	-1.2
34,515	-		Rru_B0036	0.49	-2.0
34,515	-		Rru_B0036	0.49	-0.6
34,515	-		Rru_B0036	0.49	-0.2
34,607	+		Rru_B0036	0.57	-1.3
34,625	+		Rru_B0036	0.58	-0.2
34,746	+		Rru_B0036	0.69	-0.2
34,746	+		Rru_B0036	0.69	-0.2
34,746	+		Rru_B0036	0.69	-0.2
34,747	-		Rru_B0036	0.69	-0.2
34,747	-		Rru_B0036	0.69	-0.2
34,747	-		Rru_B0036	0.69	-0.2
34,747	-		Rru_B0036	0.69	-0.8
34,748	+		Rru_B0036	0.69	-0.2
34,748	+		Rru_B0036	0.69	-0.2
34,749	-		Rru_B0036	0.69	-0.2
34,749	-		Rru_B0036	0.69	-0.2
34,749	-		Rru_B0036	0.69	-0.2
34,749	-		Rru_B0036	0.69	-0.8
34,749	-		Rru_B0036	0.69	-0.2
34,749	-		Rru_B0036	0.69	-0.2
34,749	-		Rru_B0036	0.69	-2.2
34,749	-		Rru_B0036	0.69	-0.2
34,781	+		Rru_B0036	0.72	-2.2
34,781	+		Rru_B0036	0.72	-0.2
34,782	-		Rru_B0036	0.72	-0.2
34,949	+		Rru_B0036	0.86	-3.0
35,214	-				-0.2
35,278	+				-0.2
35,279	-				-0.2
35,279	-				-0.2
35,279	-				-0.2
35,304	-				-1.8
35,305	+				-1.4
35,306	-				-0.2
35,306	-				-0.2
35,334	-				-0.2
35,359	-				-1.2
35,371	+				-1.2
35,371	+				-1.1
35,372	-				-0.2
35,372	-				-0.2
35,372	-				-1.6
35,372	-				-0.2
35,374	+				-0.2
35,374	+				-0.2
35,374	+				-0.2
35,374	+				-1.8
35,375	-				-1.2
35,375	-				-0.2
35,375	-				-1.2
35,375	-				-0.2
35,375	-				+0.8
35,375	-				-0.2
35,479	+				-1.8
35,480	-				-0.2
35,480	-				-0.2
35,480	-				-1.2
35,480	-				-1.2
35,508	-				-2.2
35,528	+				-0.2
35,540	+				-0.2
35,541	-				-0.2
35,541	-				-0.2
35,603	+				-0.2
35,615	+				-0.2
35,630	+		Rru_B0037	0.10	-0.2
35,630	+		Rru_B0037	0.10	-0.2
35,636	+		Rru_B0037	0.11	-0.2
35,636	+		Rru_B0037	0.11	-0.2
35,720	+		Rru_B0037	0.14	-2.0
35,720	+		Rru_B0037	0.14	-0.2
35,738	+		Rru_B0037	0.15	-0.2
35,767	+		Rru_B0037	0.16	-1.2
35,767	+		Rru_B0037	0.16	-0.2
35,767	+		Rru_B0037	0.16	-0.2
35,767	+		Rru_B0037	0.16	-1.8
35,767	+		Rru_B0037	0.16	-0.2
35,767	+		Rru_B0037	0.16	-0.2
35,768	-		Rru_B0037	0.16	-0.2
35,768	-		Rru_B0037	0.16	-1.2
35,768	-		Rru_B0037	0.16	-1.8
35,885	+		Rru_B0037	0.21	-0.2
35,885	+		Rru_B0037	0.21	-0.2
35,912	+		Rru_B0037	0.22	-2.3
35,912	+		Rru_B0037	0.22	-0.2
35,912	+		Rru_B0037	0.22	-0.2
35,912	+		Rru_B0037	0.22	-2.5
35,913	-		Rru_B0037	0.22	-0.2
35,913	-		Rru_B0037	0.22	-2.9
35,913	-		Rru_B0037	0.22	-0.2
35,913	-		Rru_B0037	0.22	-2.2
35,939	+		Rru_B0037	0.23	-1.2
35,939	+		Rru_B0037	0.23	-1.2
35,939	+		Rru_B0037	0.23	-0.2
35,939	+		Rru_B0037	0.23	-0.2
35,940	-		Rru_B0037	0.23	-2.3
35,940	-		Rru_B0037	0.23	-0.2
36,078	+		Rru_B0037	0.28	-0.2
36,078	+		Rru_B0037	0.28	-1.1
36,078	+		Rru_B0037	0.28	-2.2
36,079	-		Rru_B0037	0.28	-2.5
36,079	-		Rru_B0037	0.28	-0.2
36,079	-		Rru_B0037	0.28	-0.2
36,079	-		Rru_B0037	0.28	-0.2
36,079	-		Rru_B0037	0.28	-1.2
36,079	-		Rru_B0037	0.28	-0.2
36,164	+		Rru_B0037	0.32	-0.2
36,165	-		Rru_B0037	0.32	-1.2
36,171	-		Rru_B0037	0.32	-0.2
36,219	-		Rru_B0037	0.34	-1.2
36,219	-		Rru_B0037	0.34	-0.2
36,219	-		Rru_B0037	0.34	-0.2
36,219	-		Rru_B0037	0.34	-2.1
36,219	-		Rru_B0037	0.34	-1.2
36,237	-		Rru_B0037	0.35	-0.2
36,237	-		Rru_B0037	0.35	-0.2
36,276	+		Rru_B0037	0.36	-0.2
36,276	+		Rru_B0037	0.36	-0.2
36,276	+		Rru_B0037	0.36	-2.5
36,276	+		Rru_B0037	0.36	-0.2
36,276	+		Rru_B0037	0.36	-0.2
36,277	-		Rru_B0037	0.36	-0.2
36,277	-		Rru_B0037	0.36	-0.2
36,277	-		Rru_B0037	0.36	-0.2
36,312	-		Rru_B0037	0.38	-0.2
36,353	+		Rru_B0037	0.39	-2.3
36,398	+		Rru_B0037	0.41	-0.2
36,399	-		Rru_B0037	0.41	-0.2
36,487	+		Rru_B0037	0.45	-0.9
36,487	+		Rru_B0037	0.45	-0.2
36,487	+		Rru_B0037	0.45	-0.2
36,488	-		Rru_B0037	0.45	-0.2
36,488	-		Rru_B0037	0.45	-2.9
36,488	-		Rru_B0037	0.45	-0.4
36,509	+		Rru_B0037	0.46	-0.2
36,509	+		Rru_B0037	0.46	-0.2
36,510	-		Rru_B0037	0.46	-0.2
36,524	+		Rru_B0037	0.46	-0.2
36,524	+		Rru_B0037	0.46	-1.2
36,551	+		Rru_B0037	0.47	-0.2
36,552	-		Rru_B0037	0.47	-0.2
36,552	-		Rru_B0037	0.47	-0.2
36,606	-		Rru_B0037	0.49	-0.2
36,606	-		Rru_B0037	0.49	-0.2
36,606	-		Rru_B0037	0.49	-0.2
36,608	+		Rru_B0037	0.50	-1.2
36,608	+		Rru_B0037	0.50	-2.6
36,608	+		Rru_B0037	0.50	-1.2
36,608	+		Rru_B0037	0.50	-1.2
36,609	-		Rru_B0037	0.50	-0.2
36,851	+		Rru_B0037	0.59	-0.2
36,881	+		Rru_B0037	0.60	-0.2
36,881	+		Rru_B0037	0.60	-0.2
36,881	+		Rru_B0037	0.60	-0.2
36,881	+		Rru_B0037	0.60	-0.2
36,881	+		Rru_B0037	0.60	-0.2
36,882	-		Rru_B0037	0.61	-0.2
36,924	+		Rru_B0037	0.62	-2.7
36,924	+		Rru_B0037	0.62	-0.2
36,924	+		Rru_B0037	0.62	-2.0
36,924	+		Rru_B0037	0.62	-0.2
36,925	-		Rru_B0037	0.62	-2.4
36,925	-		Rru_B0037	0.62	-2.3
36,925	-		Rru_B0037	0.62	-0.2
36,993	+		Rru_B0037	0.65	-0.2
36,993	+		Rru_B0037	0.65	-0.2
36,993	+		Rru_B0037	0.65	-0.2
36,993	+		Rru_B0037	0.65	-0.2
36,993	+		Rru_B0037	0.65	-0.2
36,994	-		Rru_B0037	0.65	-0.2
36,994	-		Rru_B0037	0.65	-0.2
36,994	-		Rru_B0037	0.65	-1.2
36,994	-		Rru_B0037	0.65	-0.2
37,118	+		Rru_B0037	0.70	-1.9
37,119	-		Rru_B0037	0.70	-0.2
37,119	-		Rru_B0037	0.70	-0.2
37,180	+		Rru_B0037	0.72	-2.2
37,180	+		Rru_B0037	0.72	-0.2
37,181	-		Rru_B0037	0.73	-2.5
37,193	+		Rru_B0037	0.73	-0.2
37,280	+		Rru_B0037	0.76	-2.5
37,280	+		Rru_B0037	0.76	-2.5
37,281	-		Rru_B0037	0.77	-1.9
37,281	-		Rru_B0037	0.77	-2.3
37,328	+		Rru_B0037	0.78	-0.2
37,328	+		Rru_B0037	0.78	-0.2
37,328	+		Rru_B0037	0.78	-2.3
37,328	+		Rru_B0037	0.78	-0.2
37,328	+		Rru_B0037	0.78	-0.2
37,328	+		Rru_B0037	0.78	-0.2
37,329	-		Rru_B0037	0.78	-0.2
37,329	-		Rru_B0037	0.78	-0.2
37,329	-		Rru_B0037	0.78	-1.8
37,329	-		Rru_B0037	0.78	-0.2
37,340	+		Rru_B0037	0.79	-0.2
37,340	+		Rru_B0037	0.79	-0.2
37,340	+		Rru_B0037	0.79	-0.2
37,340	+		Rru_B0037	0.79	-0.2
37,340	+		Rru_B0037	0.79	-0.2
37,340	+		Rru_B0037	0.79	-0.2
37,340	+		Rru_B0037	0.79	-2.8
37,341	-		Rru_B0037	0.79	-0.2
37,341	-		Rru_B0037	0.79	-0.2
37,341	-		Rru_B0037	0.79	-0.2
37,341	-		Rru_B0037	0.79	-2.6
37,341	-		Rru_B0037	0.79	-0.2
37,344	-		Rru_B0037	0.79	-2.6
37,344	-		Rru_B0037	0.79	-0.2
37,366	+		Rru_B0037	0.80	-3.0
37,366	+		Rru_B0037	0.80	-1.2
37,367	-		Rru_B0037	0.80	-0.2
37,421	+		Rru_B0037	0.82	-1.2
37,422	-		Rru_B0037	0.82	-1.8
37,422	-		Rru_B0037	0.82	-2.8
37,422	-		Rru_B0037	0.82	-0.2
37,429	+		Rru_B0037	0.82	-0.2
37,429	+		Rru_B0037	0.82	-0.2
37,429	+		Rru_B0037	0.82	-1.2
37,430	-		Rru_B0037	0.83	-0.2
37,430	-		Rru_B0037	0.83	-0.2
37,507	+		Rru_B0037	0.86	-0.2
37,507	+		Rru_B0037	0.86	-0.2
37,507	+		Rru_B0037	0.86	-0.2
37,507	+		Rru_B0037	0.86	-0.2
37,507	+		Rru_B0037	0.86	-1.9
37,508	-		Rru_B0037	0.86	-0.2
37,570	+		Rru_B0037	0.88	-0.2
37,570	+		Rru_B0037	0.88	-0.2
37,570	+		Rru_B0037	0.88	-0.2
37,570	+		Rru_B0037	0.88	-0.2
37,570	+		Rru_B0037	0.88	-0.2
37,570	+		Rru_B0037	0.88	-2.5
37,570	+		Rru_B0037	0.88	-0.2
37,571	-		Rru_B0037	0.88	-0.2
37,571	-		Rru_B0037	0.88	-0.2
37,571	-		Rru_B0037	0.88	-0.2
37,571	-		Rru_B0037	0.88	-1.2
37,571	-		Rru_B0037	0.88	-2.1
37,571	-		Rru_B0037	0.88	-0.2
37,571	-		Rru_B0037	0.88	-1.2
37,571	-		Rru_B0037	0.88	-0.2
37,631	-				-0.2
37,708	+				-2.4
37,708	+				-2.3
37,709	-				-0.2
37,709	-				-0.2
37,709	-				-0.2
37,711	+				-0.2
37,711	+				-0.2
37,711	+				-0.2
37,711	+				-0.2
37,712	-				-3.0
37,712	-				-2.1
37,726	+				-0.2
37,726	+				-0.2
37,726	+				-0.2
37,726	+				-0.2
37,727	-				-0.2
37,727	-				-0.2
37,727	-				-0.2
37,727	-				-2.3
37,727	-				-2.1
37,727	-				-0.2
37,727	-				-0.2
37,768	+				-0.2
37,768	+				-0.2
37,768	+				-2.1
37,768	+				-0.2
37,768	+				-1.2
37,768	+				-0.2
37,769	-				-2.6
37,769	-				-2.5
37,769	-				-2.4
37,769	-				-0.2
37,837	+				-2.0
37,838	-				-1.2
37,840	+				-0.2
37,840	+				-2.4
37,840	+				-0.2
37,840	+				-0.2
37,841	-				-2.3
37,841	-				-0.2
37,841	-				-0.2
37,851	-				-0.2
37,870	+				-0.2
37,871	-				-0.2
37,897	+				-0.2
37,898	-				-0.2
37,898	-				-0.2
37,898	-				-0.2
38,005	+				-2.6
38,006	-				-2.4
38,006	-				-0.2
38,008	+				-2.1
38,008	+				-1.8
38,008	+				-1.2
38,008	+				-2.3
38,009	-				-1.8
38,009	-				-2.3
38,034	+				-1.2
38,035	-				-0.2
38,035	-				-0.2
38,035	-				-0.2
38,036	+				-0.2
38,036	+				-0.2
38,036	+				-0.2
38,037	-				-0.2
38,037	-				-0.2
38,037	-				-0.2
38,037	-				-0.2
38,054	+				-0.2
38,054	+				-0.2
38,054	+				-1.2
38,054	+				-0.2
38,054	+				-0.2
38,054	+				-2.6
38,055	-				-0.2
38,058	+				-0.2
38,058	+				-0.2
38,058	+				-0.2
38,059	-				-0.2
38,059	-				-0.2
38,163	+				-0.2
38,163	+				-0.2
38,178	+				-0.2
38,231	+				-0.2
38,251	+				-0.2
38,251	+				-0.2
38,252	-				-1.8
38,252	-				-1.2
38,721	+		Rru_B0038	0.71	-0.2