Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3125

Experiment: KB with Nitrofurantoin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nitrofurantoin 0.25 mg/ml
3,746,921	-		Psyr_3124	0.67	+0.6
3,746,952	-		Psyr_3124	0.69	-0.5
3,747,139	+		Psyr_3124	0.77	-1.1
3,747,139	+		Psyr_3124	0.77	+2.4
3,747,270	-		Psyr_3124	0.84	-0.1
3,747,575	+				-1.0
3,747,576	-				+0.4
3,747,576	-				+0.1
3,747,576	-				+1.9
3,747,605	+				+1.6
3,747,620	+				-1.0
3,747,620	+				+1.0
3,747,620	+				+1.2
3,747,620	+				-0.1
3,747,620	+				+1.2
3,747,620	+				+1.0
3,747,620	+				+0.0
3,747,620	+				-0.4
3,747,620	+				+1.2
3,747,621	-				-1.8
3,747,621	-				+0.1
3,747,621	-				-0.0
3,747,621	-				+0.5
3,747,621	-				-1.8
3,747,739	-				-0.6
3,747,739	-				-0.1
3,747,747	+				+0.2
3,747,785	-				+0.5
3,747,785	-				+0.2
3,747,791	+				-0.9
3,747,867	+				+0.6
3,747,867	+				-0.8
3,747,867	+				+0.9
3,747,868	-				+0.6
3,748,050	+		Psyr_3125	0.38	-0.9
3,748,084	+		Psyr_3125	0.43	-1.1
3,748,084	+		Psyr_3125	0.43	+0.7
3,748,084	+		Psyr_3125	0.43	+0.7
3,748,085	-		Psyr_3125	0.43	+1.5
3,748,085	-		Psyr_3125	0.43	+1.5
3,748,085	-		Psyr_3125	0.43	-0.6
3,748,179	+		Psyr_3125	0.58	+0.5
3,748,180	-		Psyr_3125	0.58	+0.0
3,748,205	+		Psyr_3125	0.62	-1.4
3,748,206	-		Psyr_3125	0.62	+0.5
3,748,592	+				+1.2
3,748,592	+				-0.7
3,748,592	+				+0.6
3,748,593	-				-1.2
3,748,606	+				-0.2
3,748,606	+				+1.0
3,748,606	+				-0.4
3,748,607	-				+0.7
3,748,607	-				+0.1
3,748,607	-				+1.3
3,748,607	-				-0.9
3,748,607	-				+2.2
3,748,607	-				-0.0
3,749,031	+		Psyr_3126	0.47	-0.9
3,749,031	+		Psyr_3126	0.47	-0.3
3,749,031	+		Psyr_3126	0.47	+0.6
3,749,031	+		Psyr_3126	0.47	-0.5
3,749,031	+		Psyr_3126	0.47	+2.8
3,749,031	+		Psyr_3126	0.47	-0.9
3,749,031	+		Psyr_3126	0.47	+0.1
3,749,031	+		Psyr_3126	0.47	+0.0
3,749,032	-		Psyr_3126	0.47	+0.6
3,749,032	-		Psyr_3126	0.47	+0.1
3,749,032	-		Psyr_3126	0.47	+1.2
3,749,032	-		Psyr_3126	0.47	+0.4
3,749,204	-		Psyr_3126	0.65	+0.5
3,749,278	+		Psyr_3126	0.73	+0.2
3,749,278	+		Psyr_3126	0.73	+0.5
3,749,278	+		Psyr_3126	0.73	+2.1
3,749,278	+		Psyr_3126	0.73	-0.6
3,749,278	+		Psyr_3126	0.73	+1.1
3,749,279	-		Psyr_3126	0.73	+0.2
3,749,279	-		Psyr_3126	0.73	-0.1
3,749,279	-		Psyr_3126	0.73	+0.8
3,749,283	+		Psyr_3126	0.74	+1.0
3,749,283	+		Psyr_3126	0.74	+0.0
3,749,283	+		Psyr_3126	0.74	+0.1
3,749,283	+		Psyr_3126	0.74	-0.5
3,749,284	-		Psyr_3126	0.74	+0.1
3,749,284	-		Psyr_3126	0.74	+2.5
3,749,284	-		Psyr_3126	0.74	-1.1
3,749,290	+		Psyr_3126	0.74	-0.3
3,749,291	-		Psyr_3126	0.75	+0.5
3,749,291	-		Psyr_3126	0.75	+2.1