Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3117

Experiment: KB with Nitrofurantoin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nitrofurantoin 0.25 mg/ml
3,735,287	+		Psyr_3116	0.45	-0.8
3,735,288	-		Psyr_3116	0.45	+1.1
3,735,288	-		Psyr_3116	0.45	-0.2
3,735,395	-		Psyr_3116	0.55	-0.3
3,735,582	-		Psyr_3116	0.72	-0.6
3,735,652	+		Psyr_3116	0.79	+0.2
3,735,653	-		Psyr_3116	0.79	-2.6
3,735,800	+				-0.3
3,735,800	+				+1.8
3,735,801	-				-1.0
3,735,821	+				-0.9
3,735,821	+				+0.1
3,735,934	+				-0.2
3,735,934	+				+0.2
3,735,935	-				+0.7
3,735,935	-				+0.0
3,735,935	-				-0.8
3,735,952	+				-0.1
3,735,952	+				+0.7
3,735,953	-				+0.5
3,735,994	+				+0.2
3,735,994	+				-1.6
3,735,994	+				-1.8
3,735,994	+				+0.6
3,735,994	+				-0.6
3,735,995	-				+2.4
3,735,995	-				-0.0
3,735,995	-				+0.1
3,735,995	-				-0.1
3,735,995	-				-0.1
3,735,995	-				+0.5
3,735,995	-				+0.1
3,735,995	-				+1.4
3,736,035	+				+1.1
3,736,035	+				+0.4
3,736,035	+				+0.5
3,736,035	+				+0.7
3,736,035	+				-1.8
3,736,035	+				-0.3
3,736,035	+				-0.2
3,736,036	-				+0.2
3,736,036	-				-0.2
3,736,036	-				+0.1
3,736,036	-				-1.3
3,736,036	-				+2.7
3,736,036	-				+3.2
3,736,036	-				+0.0
3,736,156	-		Psyr_3117	0.10	-1.7
3,736,486	-		Psyr_3117	0.38	-0.0
3,736,527	+		Psyr_3117	0.42	-0.0
3,736,528	-		Psyr_3117	0.42	+0.2
3,736,533	+		Psyr_3117	0.42	-0.9
3,736,686	+		Psyr_3117	0.55	-1.3
3,736,687	-		Psyr_3117	0.55	+0.9
3,736,824	+		Psyr_3117	0.67	+0.2
3,736,835	+		Psyr_3117	0.68	-2.1
3,736,836	-		Psyr_3117	0.68	-0.6
3,736,911	-		Psyr_3117	0.75	-0.2
3,736,938	+		Psyr_3117	0.77	-0.4
3,736,939	-		Psyr_3117	0.77	-1.5
3,737,031	-		Psyr_3117	0.85	+0.8
3,737,031	-		Psyr_3117	0.85	-0.8
3,737,205	+				+0.1
3,737,205	+				-0.4
3,737,206	-				+1.1
3,737,208	+				+0.2
3,737,208	+				-0.8
3,737,208	+				-0.9
3,737,208	+				+0.7
3,737,209	-				-0.6
3,737,209	-				+1.7
3,737,209	-				-1.8
3,737,227	+				-0.1
3,737,228	-				-0.9
3,737,343	+				+0.7
3,737,382	-				-1.2
3,737,620	+				-0.8
3,738,034	+				+1.2