Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3006

Experiment: KB with Nitrofurantoin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nitrofurantoin 0.25 mg/ml
3,600,845	-				+1.7
3,600,845	-				+0.1
3,600,845	-				-0.1
3,600,998	-		Psyr_3005	0.13	-0.3
3,601,448	+		Psyr_3005	0.70	+0.7
3,601,485	+		Psyr_3005	0.74	+1.5
3,601,651	-				-0.3
3,601,720	+				+0.3
3,601,721	-				+0.7
3,601,721	-				+1.0
3,601,740	+				+0.5
3,601,740	+				+1.2
3,601,740	+				+1.9
3,601,740	+				-1.1
3,601,741	-				+0.3
3,601,741	-				+0.3
3,601,741	-				+0.3
3,601,741	-				-1.7
3,601,741	-				-0.1
3,601,741	-				+0.6
3,601,741	-				-0.4
3,601,741	-				-0.0
3,601,741	-				-0.3
3,601,741	-				-0.4
3,601,741	-				+0.8
3,601,741	-				+0.2
3,601,895	+		Psyr_3006	0.22	-1.2
3,601,895	+		Psyr_3006	0.22	+1.2
3,601,895	+		Psyr_3006	0.22	+1.0
3,601,896	-		Psyr_3006	0.22	+1.5
3,601,896	-		Psyr_3006	0.22	+1.3
3,601,896	-		Psyr_3006	0.22	-0.5
3,602,028	+		Psyr_3006	0.58	+0.7
3,602,028	+		Psyr_3006	0.58	-0.4
3,602,029	-		Psyr_3006	0.58	+2.0
3,602,029	-		Psyr_3006	0.58	+0.2
3,602,079	+		Psyr_3006	0.72	-0.7
3,602,079	+		Psyr_3006	0.72	+0.6
3,602,178	+				-0.5
3,602,178	+				-0.4
3,602,178	+				+1.3
3,602,178	+				+1.3
3,602,178	+				-0.3
3,602,178	+				+0.0
3,602,179	-				-0.9
3,602,179	-				-1.7
3,602,179	-				+0.1
3,602,179	-				-1.0
3,602,265	-		Psyr_3007	0.20	+0.4
3,602,265	-		Psyr_3007	0.20	+1.8
3,602,502	+		Psyr_3007	0.75	+0.0
3,602,702	+		Psyr_3008	0.11	-3.7
3,602,703	-		Psyr_3008	0.11	-3.4
3,602,703	-		Psyr_3008	0.11	-2.3
3,602,820	-		Psyr_3008	0.26	-4.1
3,602,820	-		Psyr_3008	0.26	-0.1
3,602,825	+		Psyr_3008	0.26	-3.1
3,602,834	+		Psyr_3008	0.27	-2.5
3,602,834	+		Psyr_3008	0.27	-4.1
3,602,834	+		Psyr_3008	0.27	-3.0
3,602,835	-		Psyr_3008	0.27	-2.7
3,602,835	-		Psyr_3008	0.27	-1.1
3,602,974	+		Psyr_3008	0.44	-2.0
3,602,974	+		Psyr_3008	0.44	-2.5
3,602,974	+		Psyr_3008	0.44	-2.7
3,602,975	-		Psyr_3008	0.44	-1.5
3,602,984	-		Psyr_3008	0.45	-0.3
3,603,009	+		Psyr_3008	0.48	-4.1
3,603,009	+		Psyr_3008	0.48	-3.6
3,603,010	-		Psyr_3008	0.48	-2.5
3,603,010	-		Psyr_3008	0.48	-2.5
3,603,010	-		Psyr_3008	0.48	-1.6