Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2969

Experiment: KB with Nitrofurantoin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nitrofurantoin 0.25 mg/ml
3,559,829	+		Psyr_2968	0.69	-0.2
3,559,829	+		Psyr_2968	0.69	-0.7
3,559,829	+		Psyr_2968	0.69	-3.0
3,559,915	+		Psyr_2968	0.71	+0.3
3,559,915	+				+0.3
3,559,915	+		Psyr_2968	0.71	+0.6
3,559,915	+		Psyr_2968	0.71	-1.6
3,559,916	-		Psyr_2968	0.71	-2.1
3,559,916	-		Psyr_2968	0.71	-2.5
3,559,931	-		Psyr_2968	0.72	+0.0
3,559,963	+		Psyr_2968	0.73	-1.1
3,559,963	+		Psyr_2968	0.73	-3.1
3,559,964	-		Psyr_2968	0.73	-0.5
3,559,964	-		Psyr_2968	0.73	-1.2
3,560,113	+		Psyr_2968	0.78	-1.6
3,560,114	-		Psyr_2968	0.78	-0.4
3,560,114	-		Psyr_2968	0.78	-1.2
3,560,114	-		Psyr_2968	0.78	-1.4
3,560,114	-		Psyr_2968	0.78	-3.2
3,560,230	+		Psyr_2968	0.81	-1.2
3,560,231	-		Psyr_2968	0.81	+0.3
3,560,251	+		Psyr_2968	0.82	-0.9
3,560,335	+		Psyr_2968	0.85	-0.9
3,560,335	+		Psyr_2968	0.85	-1.8
3,560,336	-		Psyr_2968	0.85	-1.5
3,560,734	+				+0.3
3,560,748	+				+0.3
3,560,749	-				-3.4
3,560,752	+				-1.9
3,560,753	-				-0.3
3,560,888	-				-2.0
3,560,952	+				+1.5
3,560,952	+				-1.8
3,560,952	+				+0.2
3,560,952	+				-0.1
3,560,953	-				-0.1
3,560,953	-				-1.1
3,561,011	+		Psyr_2969	0.13	+0.2
3,561,248	+		Psyr_2969	0.30	-0.4
3,561,248	+		Psyr_2969	0.30	+1.9
3,561,249	-		Psyr_2969	0.30	+0.0
3,561,249	-		Psyr_2969	0.30	-0.1
3,561,250	+		Psyr_2969	0.30	-0.0
3,561,250	+		Psyr_2969	0.30	-0.3
3,561,250	+		Psyr_2969	0.30	+0.6
3,561,250	+		Psyr_2969	0.30	+1.6
3,561,251	-		Psyr_2969	0.30	-3.6
3,561,251	-		Psyr_2969	0.30	+0.3
3,561,251	-		Psyr_2969	0.30	-0.9
3,561,306	+		Psyr_2969	0.34	-0.3
3,561,307	-		Psyr_2969	0.34	+0.0
3,561,930	+		Psyr_2969	0.79	+2.2
3,561,930	+		Psyr_2969	0.79	-2.1
3,561,930	+		Psyr_2969	0.79	-1.0
3,561,931	-		Psyr_2969	0.79	-1.5
3,561,931	-		Psyr_2969	0.79	-1.8
3,561,931	-		Psyr_2969	0.79	-1.3
3,561,931	-		Psyr_2969	0.79	-3.2
3,561,931	-		Psyr_2969	0.79	+0.6
3,561,931	-		Psyr_2969	0.79	-2.7
3,562,185	+				+0.3
3,562,185	+				-0.1
3,562,185	+				+1.3
3,562,185	+				+0.3
3,562,185	+				+2.1
3,562,185	+				-0.5
3,562,186	-				-0.1
3,562,186	-				+0.1
3,562,186	-				-0.2
3,562,186	-				+0.3
3,562,186	-				-1.8
3,562,186	-				+1.7
3,562,381	-				-2.0
3,562,519	-		Psyr_2970	0.14	-0.3
3,562,522	+		Psyr_2970	0.14	-0.6
3,562,522	+		Psyr_2970	0.14	-2.5
3,562,522	+		Psyr_2970	0.14	-0.9
3,562,523	-		Psyr_2970	0.14	+0.8
3,562,523	-		Psyr_2970	0.14	-1.1
3,562,523	-		Psyr_2970	0.14	-0.7
3,562,523	-		Psyr_2970	0.14	-0.1
3,562,523	-		Psyr_2970	0.14	-0.4
3,562,523	-		Psyr_2970	0.14	-0.5
3,562,862	-		Psyr_2970	0.45	+0.7
3,562,862	-		Psyr_2970	0.45	-0.7
3,562,958	-		Psyr_2970	0.54	-0.5
3,562,997	+		Psyr_2970	0.58	-0.5
3,563,057	+		Psyr_2970	0.63	-1.4