Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2404

Experiment: KB with Nitrofurantoin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nitrofurantoin 0.25 mg/ml
2,785,156	+		Psyr_2402	0.66	+2.5
2,785,157	-		Psyr_2402	0.66	+0.9
2,785,638	+				+0.2
2,785,638	+				+0.9
2,785,677	+		Psyr_2403	0.16	-0.1
2,785,677	+		Psyr_2403	0.16	+0.0
2,785,677	+		Psyr_2403	0.16	+0.3
2,785,678	-		Psyr_2403	0.17	-0.0
2,785,678	-		Psyr_2403	0.17	+0.5
2,785,686	+		Psyr_2403	0.20	+1.4
2,785,687	-		Psyr_2403	0.20	-0.7
2,785,833	+		Psyr_2403	0.70	+0.6
2,785,834	-		Psyr_2403	0.70	-0.4
2,785,995	+				-0.8
2,785,995	+				-0.0
2,785,995	+				-1.4
2,785,995	+				+2.0
2,785,995	+				-0.2
2,785,996	-				+0.3
2,785,996	-				-0.7
2,785,996	-				-0.4
2,786,000	-				+0.5
2,786,005	-				-2.2
2,786,031	+		Psyr_2404	0.14	+0.6
2,786,031	+		Psyr_2404	0.14	+0.3
2,786,031	+		Psyr_2404	0.14	+0.1
2,786,032	-		Psyr_2404	0.14	+0.5
2,786,042	+		Psyr_2404	0.16	+1.2
2,786,064	+		Psyr_2404	0.20	+0.4
2,786,064	+		Psyr_2404	0.20	+0.3
2,786,064	+		Psyr_2404	0.20	-2.0
2,786,064	+		Psyr_2404	0.20	+0.8
2,786,064	+		Psyr_2404	0.20	-0.9
2,786,064	+		Psyr_2404	0.20	-0.8
2,786,064	+		Psyr_2404	0.20	+0.2
2,786,064	+		Psyr_2404	0.20	+0.6
2,786,064	+		Psyr_2404	0.20	+0.7
2,786,064	+		Psyr_2404	0.20	+0.2
2,786,065	-		Psyr_2404	0.20	+1.3
2,786,065	-		Psyr_2404	0.20	+0.2
2,786,065	-		Psyr_2404	0.20	+0.9
2,786,065	-		Psyr_2404	0.20	+0.5
2,786,065	-		Psyr_2404	0.20	-0.4
2,786,065	-		Psyr_2404	0.20	-0.5
2,786,065	-		Psyr_2404	0.20	-0.7
2,786,065	-		Psyr_2404	0.20	-0.9
2,786,169	+		Psyr_2404	0.38	-0.9
2,786,169	+		Psyr_2404	0.38	+1.3
2,786,169	+		Psyr_2404	0.38	-0.9
2,786,170	-		Psyr_2404	0.39	-1.1
2,786,170	-		Psyr_2404	0.39	-0.5
2,786,170	-		Psyr_2404	0.39	-0.5
2,786,205	+		Psyr_2404	0.45	-0.2
2,786,228	+		Psyr_2404	0.49	-2.7
2,786,228	+		Psyr_2404	0.49	+0.8
2,786,352	+		Psyr_2404	0.71	-0.5
2,786,352	+		Psyr_2404	0.71	+1.2
2,786,352	+		Psyr_2404	0.71	+0.3
2,786,352	+		Psyr_2404	0.71	-1.8
2,786,353	-		Psyr_2404	0.71	+0.4
2,786,353	-		Psyr_2404	0.71	-0.4
2,786,353	-		Psyr_2404	0.71	+1.4
2,786,353	-		Psyr_2404	0.71	+0.8
2,786,369	+		Psyr_2404	0.74	-0.5
2,786,403	+		Psyr_2404	0.80	+0.3
2,786,404	-		Psyr_2404	0.80	-0.5
2,786,412	+		Psyr_2404	0.82	+0.7
2,786,413	-		Psyr_2404	0.82	-0.8
2,786,413	-		Psyr_2404	0.82	-0.3
2,786,413	-		Psyr_2404	0.82	-1.1
2,786,526	+				+1.5
2,786,526	+				-0.1
2,786,527	-				+3.6
2,786,527	-				-1.2
2,786,527	-				-0.4
2,786,527	-				+0.7
2,786,603	-		Psyr_2405	0.11	-1.3
2,786,631	+		Psyr_2405	0.15	-1.1
2,786,631	+		Psyr_2405	0.15	-0.3
2,786,632	-		Psyr_2405	0.15	+0.4
2,786,632	-		Psyr_2405	0.15	+0.5
2,786,758	+		Psyr_2405	0.32	+1.9
2,786,758	+		Psyr_2405	0.32	-0.5
2,786,826	+		Psyr_2405	0.41	-0.2
2,786,826	+		Psyr_2405	0.41	-1.5
2,786,826	+		Psyr_2405	0.41	+2.9
2,786,826	+		Psyr_2405	0.41	-0.2
2,786,826	+		Psyr_2405	0.41	+0.8
2,786,827	-		Psyr_2405	0.41	+2.3
2,786,827	-		Psyr_2405	0.41	+2.1
2,786,827	-		Psyr_2405	0.41	+0.7
2,786,827	-		Psyr_2405	0.41	-0.7
2,786,827	-		Psyr_2405	0.41	+1.9
2,786,833	+		Psyr_2405	0.42	-0.8
2,786,833	+		Psyr_2405	0.42	+0.8
2,786,985	+		Psyr_2405	0.62	+0.5
2,786,986	-		Psyr_2405	0.62	+0.1
2,786,986	-		Psyr_2405	0.62	+0.6
2,787,317	+				+0.1
2,787,485	+				+0.5