Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1892

Experiment: KB with Nitrofurantoin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nitrofurantoin 0.25 mg/ml
2,161,229	+				+0.2
2,161,229	+				+0.7
2,161,229	+				-0.8
2,161,229	+				+1.3
2,161,229	+				+2.7
2,161,229	+				-1.2
2,161,230	-				-1.7
2,161,230	-				-0.8
2,161,230	-				-0.4
2,161,230	-				+0.5
2,161,230	-				-0.7
2,161,230	-				-1.2
2,161,240	-				+0.1
2,161,290	+				+0.9
2,161,290	+				+0.1
2,161,291	-				+0.0
2,161,291	-				-0.3
2,161,291	-				+1.2
2,161,316	+				-0.4
2,161,317	-				-0.2
2,161,317	-				+0.1
2,161,317	-				+0.8
2,161,317	-				-1.1
2,161,350	+				+0.3
2,161,350	+				+0.8
2,161,350	+				-0.8
2,161,351	-				-1.5
2,161,351	-				+0.9
2,161,361	+				-0.8
2,161,361	+				-0.2
2,161,361	+				-0.7
2,161,361	+				-0.3
2,161,361	+				+0.0
2,161,361	+				+0.6
2,161,361	+				-0.6
2,161,362	-				-0.2
2,161,362	-				+1.7
2,161,362	-				-0.4
2,161,362	-				-0.1
2,161,362	-				-0.2
2,161,366	-				-0.1
2,161,366	-				+0.3
2,161,366	-				+0.3
2,161,512	+		Psyr_1891	0.37	-0.2
2,161,512	+		Psyr_1891	0.37	-0.5
2,161,512	+		Psyr_1891	0.37	-0.1
2,161,512	+		Psyr_1891	0.37	+1.5
2,161,513	-		Psyr_1891	0.38	-0.9
2,161,602	+		Psyr_1891	0.67	-0.4
2,161,606	-		Psyr_1891	0.68	-0.1
2,161,606	-		Psyr_1891	0.68	-0.5
2,161,612	+		Psyr_1891	0.70	-0.3
2,161,612	+		Psyr_1891	0.70	-0.0
2,161,613	-		Psyr_1891	0.71	-0.3
2,161,613	-		Psyr_1891	0.71	-0.5
2,161,655	-		Psyr_1891	0.84	-1.0
2,161,760	+				+0.2
2,161,760	+				-0.1
2,161,760	+				+0.2
2,161,760	+				+1.2
2,161,760	+				-0.1
2,161,761	-				-0.3
2,161,761	-				+1.0
2,161,761	-				+0.6
2,161,805	+				-1.3
2,161,899	+				-3.2
2,162,221	+				+1.7
2,162,222	-				-0.3
2,162,222	-				-0.2
2,162,222	-				-1.4
2,162,528	+		Psyr_1892	0.47	-0.7
2,162,528	+		Psyr_1892	0.47	-0.7
2,162,528	+		Psyr_1892	0.47	+0.9
2,162,528	+		Psyr_1892	0.47	+1.9
2,162,528	+		Psyr_1892	0.47	-0.1
2,162,528	+		Psyr_1892	0.47	-0.2
2,162,529	-		Psyr_1892	0.47	-1.8
2,162,529	-		Psyr_1892	0.47	-1.0
2,162,529	-		Psyr_1892	0.47	+0.2
2,162,529	-		Psyr_1892	0.47	+0.5
2,162,806	+		Psyr_1892	0.84	-1.5
2,162,806	+		Psyr_1892	0.84	+0.8
2,162,806	+		Psyr_1892	0.84	-3.3
2,162,806	+		Psyr_1892	0.84	+0.0
2,162,806	+		Psyr_1892	0.84	+0.3
2,162,810	+		Psyr_1892	0.85	+1.2
2,162,810	+		Psyr_1892	0.85	+0.5
2,162,892	+				-2.0
2,162,893	-				-1.7
2,162,909	+				-0.9
2,162,909	+				+0.8
2,162,910	-				-0.7
2,162,910	-				+1.1
2,162,910	-				+0.7
2,162,986	+				+2.7
2,163,141	+		Psyr_1893	0.18	-0.6
2,163,141	+		Psyr_1893	0.18	-0.4
2,163,141	+		Psyr_1893	0.18	+0.9
2,163,141	+		Psyr_1893	0.18	-2.3
2,163,141	+		Psyr_1893	0.18	-0.2
2,163,142	-		Psyr_1893	0.18	+1.3
2,163,142	-		Psyr_1893	0.18	-1.1
2,163,142	-		Psyr_1893	0.18	+2.3
2,163,142	-		Psyr_1893	0.18	+1.9
2,163,142	-		Psyr_1893	0.18	-1.5
2,163,142	-		Psyr_1893	0.18	-1.3
2,163,142	-		Psyr_1893	0.18	-0.5
2,163,142	-		Psyr_1893	0.18	-0.0
2,163,142	-		Psyr_1893	0.18	+0.0
2,163,466	+		Psyr_1893	0.75	-1.4
2,163,467	-		Psyr_1893	0.76	-0.9
2,163,551	+				+1.3
2,163,551	+				+0.4
2,163,619	+				+1.2
2,163,619	+				+0.3
2,163,619	+				+2.7
2,163,620	-				-0.1
2,163,796	+				-1.7
2,163,796	+				-0.9
2,163,796	+				-0.5
2,163,797	-				-1.1
2,163,797	-				+0.6
2,163,797	-				+0.5