Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1648
Experiment: KB with Nitrofurantoin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KB with Nitrofurantoin 0.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,853,243 | + | +1.8 | |||
1,853,252 | + | +0.9 | |||
1,853,252 | + | +0.8 | |||
1,853,252 | + | +0.6 | |||
1,853,252 | + | -1.1 | |||
1,853,252 | + | +0.4 | |||
1,853,283 | + | +0.4 | |||
1,853,306 | + | +1.3 | |||
1,853,306 | + | +0.9 | |||
1,853,319 | + | +0.1 | |||
1,853,319 | + | +0.2 | |||
1,853,390 | + | +2.0 | |||
1,853,392 | + | +0.9 | |||
1,853,392 | + | +0.1 | |||
1,854,228 | - | Psyr_1649 | 0.34 | +0.7 |
Or see this region's nucleotide sequence