Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3664

Experiment: syringaldehyde 0.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntGa0059261_3663 and Ga0059261_3664 overlap by 4 nucleotidesGa0059261_3664 and Ga0059261_3665 are separated by 21 nucleotides Ga0059261_3663: Ga0059261_3663 - UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase, at 3,776,376 to 3,777,731 _3663 Ga0059261_3664: Ga0059261_3664 - hypothetical protein, at 3,777,728 to 3,778,039 _3664 Ga0059261_3665: Ga0059261_3665 - glucosamine--fructose-6-phosphate aminotransferase (isomerizing), at 3,778,061 to 3,779,884 _3665 Position (kb) 3777 3778 3779Strain fitness (log2 ratio) -1 0 1at 3777.776 kb on + strand, within Ga0059261_3664at 3777.776 kb on + strand, within Ga0059261_3664at 3777.776 kb on + strand, within Ga0059261_3664at 3777.776 kb on + strand, within Ga0059261_3664at 3777.776 kb on + strand, within Ga0059261_3664at 3777.776 kb on + strand, within Ga0059261_3664at 3777.776 kb on + strand, within Ga0059261_3664at 3777.776 kb on + strand, within Ga0059261_3664at 3777.776 kb on + strand, within Ga0059261_3664at 3777.776 kb on + strand, within Ga0059261_3664at 3778.003 kb on + strand, within Ga0059261_3664

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Per-strain Table

Position Strand Gene LocusTag Fraction syringaldehyde 0.5 mM
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3,777,776 + Ga0059261_3664 0.15 +0.4
3,777,776 + Ga0059261_3664 0.15 +0.4
3,777,776 + Ga0059261_3664 0.15 +0.7
3,777,776 + Ga0059261_3664 0.15 +0.5
3,777,776 + Ga0059261_3664 0.15 +0.0
3,777,776 + Ga0059261_3664 0.15 +1.0
3,777,776 + Ga0059261_3664 0.15 -0.0
3,777,776 + Ga0059261_3664 0.15 -0.1
3,777,776 + Ga0059261_3664 0.15 +1.0
3,777,776 + Ga0059261_3664 0.15 +0.6
3,778,003 + Ga0059261_3664 0.88 +1.0

Or see this region's nucleotide sequence