Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2593

Experiment: syringaldehyde 0.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 0.5 mM
2,676,422	+		Ga0059261_2592	0.47	+0.1
2,676,464	+		Ga0059261_2592	0.51	+0.3
2,676,464	+		Ga0059261_2592	0.51	-0.7
2,676,464	+		Ga0059261_2592	0.51	-1.3
2,676,464	+		Ga0059261_2592	0.51	-3.2
2,676,464	+		Ga0059261_2592	0.51	-1.2
2,676,464	+				+1.0
2,676,464	+		Ga0059261_2592	0.51	+0.3
2,676,464	+		Ga0059261_2592	0.51	+0.6
2,676,465	-		Ga0059261_2592	0.51	-0.3
2,676,465	-		Ga0059261_2592	0.51	+0.2
2,676,465	-		Ga0059261_2592	0.51	-0.1
2,676,566	+		Ga0059261_2592	0.59	-0.3
2,676,566	+		Ga0059261_2592	0.59	-1.3
2,676,566	+		Ga0059261_2592	0.59	-1.2
2,676,567	-		Ga0059261_2592	0.60	+0.2
2,676,567	-		Ga0059261_2592	0.60	-0.6
2,676,567	-		Ga0059261_2592	0.60	-1.0
2,676,567	-		Ga0059261_2592	0.60	+0.7
2,676,578	+		Ga0059261_2592	0.60	+0.3
2,676,579	-		Ga0059261_2592	0.61	+1.3
2,676,638	+		Ga0059261_2592	0.65	+1.2
2,676,668	+		Ga0059261_2592	0.68	-0.1
2,676,669	-		Ga0059261_2592	0.68	+0.1
2,676,713	+		Ga0059261_2592	0.72	-0.5
2,676,714	-		Ga0059261_2592	0.72	-0.4
2,676,805	+		Ga0059261_2592	0.79	+0.1
2,676,806	-		Ga0059261_2592	0.80	-0.3
2,676,806	-		Ga0059261_2592	0.80	-0.3
2,676,856	+		Ga0059261_2592	0.84	-0.7
2,676,856	+		Ga0059261_2592	0.84	+0.6
2,676,856	+				-0.3
2,676,856	+		Ga0059261_2592	0.84	-0.6
2,676,856	+		Ga0059261_2592	0.84	+0.2
2,676,856	+		Ga0059261_2592	0.84	-0.6
2,676,857	-		Ga0059261_2592	0.84	+1.3
2,676,857	-		Ga0059261_2592	0.84	+0.4
2,676,857	-		Ga0059261_2592	0.84	-0.5
2,676,857	-		Ga0059261_2592	0.84	+1.0
2,676,876	+		Ga0059261_2592	0.85	-0.9
2,676,876	+		Ga0059261_2592	0.85	-0.9
2,676,876	+		Ga0059261_2592	0.85	+0.3
2,676,876	+		Ga0059261_2592	0.85	+0.9
2,676,876	+		Ga0059261_2592	0.85	-0.2
2,676,876	+		Ga0059261_2592	0.85	-0.3
2,676,876	+		Ga0059261_2592	0.85	-0.8
2,676,877	-		Ga0059261_2592	0.85	-0.4
2,676,891	+		Ga0059261_2592	0.87	-1.2
2,676,891	+		Ga0059261_2592	0.87	-0.6
2,676,891	+		Ga0059261_2592	0.87	-0.1
2,676,892	-		Ga0059261_2592	0.87	+0.3
2,676,892	-		Ga0059261_2592	0.87	-0.6
2,676,923	+		Ga0059261_2592	0.89	+0.3
2,676,923	+		Ga0059261_2592	0.89	-0.8
2,676,924	-		Ga0059261_2592	0.89	-0.5
2,676,924	-		Ga0059261_2592	0.89	+0.1
2,676,961	+				+0.0
2,676,962	-				-0.5
2,676,962	-				+0.5
2,676,988	+				-0.1
2,676,988	+				+0.5
2,676,988	+				+0.0
2,676,988	+				-1.1
2,676,988	+				-0.3
2,676,988	+				-1.8
2,676,989	-				-0.8
2,676,989	-				+0.2
2,677,001	+				+0.1
2,677,001	+				-0.5
2,677,001	+				+0.0
2,677,002	-				-0.8
2,677,002	-				+0.5
2,677,002	-				+0.2
2,677,002	-				-0.2
2,677,238	+				-0.9
2,677,239	-				+0.0
2,677,242	+				-0.1
2,677,243	+				-0.2
2,677,243	+				-0.6
2,677,243	+				-0.1
2,677,244	-				-1.2
2,677,244	-				-1.0
2,677,273	-				+0.8
2,677,314	-				+0.6
2,677,347	+				-0.2
2,677,347	+				+1.0
2,677,348	-				+0.8
2,677,348	-				+0.0
2,677,360	+				-1.4
2,677,360	+				+0.1
2,677,360	+				-0.2
2,677,360	+				+0.7
2,677,360	+				+0.0
2,677,360	+				-0.1
2,677,360	+				+0.2
2,677,434	+		Ga0059261_2593	0.30	+0.2
2,677,487	+				+0.4
2,677,487	+		Ga0059261_2593	0.48	+0.2
2,677,487	+		Ga0059261_2593	0.48	-0.3
2,677,487	+		Ga0059261_2593	0.48	+1.0
2,677,487	+		Ga0059261_2593	0.48	+0.9
2,677,487	+		Ga0059261_2593	0.48	+1.0
2,677,487	+		Ga0059261_2593	0.48	+0.4
2,677,625	+				+0.6
2,677,625	+				+0.4
2,677,625	+				-0.2
2,677,668	+				-0.1
2,677,669	-				-0.5
2,677,669	-				+0.1
2,677,669	-				-0.3
2,677,728	+				+1.1
2,677,728	+				+0.0
2,677,728	+				+0.3
2,677,728	+				+0.5
2,677,728	+				+0.4
2,677,728	+				+0.5
2,677,728	+				+0.4
2,677,728	+				-0.2
2,677,728	+				-0.1
2,677,728	+				-1.2
2,677,728	+				+1.0
2,677,729	-				+0.4
2,677,729	-				-0.3
2,677,729	-				-0.6
2,677,729	-				-0.4
2,677,729	-				+0.1
2,677,792	+				+0.8
2,677,792	+				-0.1
2,677,792	+				-0.3
2,677,792	+				-1.6
2,677,792	+				+0.1
2,677,856	+				-0.5
2,677,856	+				-0.8
2,677,857	-				+0.6
2,677,857	-				+1.0
2,677,921	+				-1.3
2,677,921	+				-0.2
2,677,921	+				-0.4
2,677,997	+		Ga0059261_2594	0.13	+0.0
2,677,998	-		Ga0059261_2594	0.13	-0.1
2,677,998	-		Ga0059261_2594	0.13	-0.7
2,678,068	+		Ga0059261_2594	0.17	+0.1
2,678,068	+		Ga0059261_2594	0.17	-0.2
2,678,069	-		Ga0059261_2594	0.17	-0.1
2,678,069	-				+0.0
2,678,069	-		Ga0059261_2594	0.17	+0.5
2,678,105	+		Ga0059261_2594	0.19	+0.2
2,678,105	+				+0.4
2,678,105	+		Ga0059261_2594	0.19	+0.4
2,678,105	+		Ga0059261_2594	0.19	-0.7
2,678,105	+		Ga0059261_2594	0.19	-0.5
2,678,105	+		Ga0059261_2594	0.19	+1.0
2,678,105	+		Ga0059261_2594	0.19	-0.4
2,678,106	-		Ga0059261_2594	0.19	+0.5
2,678,106	-		Ga0059261_2594	0.19	-0.6
2,678,106	-		Ga0059261_2594	0.19	+0.8
2,678,106	-		Ga0059261_2594	0.19	-0.3
2,678,106	-		Ga0059261_2594	0.19	+0.1
2,678,106	-		Ga0059261_2594	0.19	-0.3
2,678,106	-		Ga0059261_2594	0.19	+0.8
2,678,106	-		Ga0059261_2594	0.19	-0.1
2,678,106	-		Ga0059261_2594	0.19	-0.8
2,678,106	-		Ga0059261_2594	0.19	-1.8
2,678,106	-		Ga0059261_2594	0.19	+0.5
2,678,203	+		Ga0059261_2594	0.25	+0.3
2,678,203	+		Ga0059261_2594	0.25	+0.2
2,678,203	+		Ga0059261_2594	0.25	-1.1
2,678,204	-		Ga0059261_2594	0.25	-0.6
2,678,204	-		Ga0059261_2594	0.25	-0.1
2,678,204	-		Ga0059261_2594	0.25	-0.1
2,678,204	-		Ga0059261_2594	0.25	+0.2
2,678,459	+		Ga0059261_2594	0.40	-1.4
2,678,473	+		Ga0059261_2594	0.41	+0.5
2,678,473	+		Ga0059261_2594	0.41	+0.5
2,678,555	+		Ga0059261_2594	0.46	+0.2
2,678,555	+		Ga0059261_2594	0.46	-0.3
2,678,555	+		Ga0059261_2594	0.46	+0.1
2,678,555	+		Ga0059261_2594	0.46	-1.0
2,678,556	-		Ga0059261_2594	0.46	-0.3
2,678,556	-		Ga0059261_2594	0.46	+0.2
2,678,556	-		Ga0059261_2594	0.46	-0.3
2,678,556	-		Ga0059261_2594	0.46	+0.2
2,678,556	-		Ga0059261_2594	0.46	-0.8
2,678,556	-		Ga0059261_2594	0.46	-0.7
2,678,580	+		Ga0059261_2594	0.47	-0.4
2,678,631	+		Ga0059261_2594	0.50	-1.7
2,678,631	+		Ga0059261_2594	0.50	+0.2