Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2548

Experiment: syringaldehyde 0.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 0.5 mM
2,634,613	+		Ga0059261_2546	0.13	+0.3
2,634,615	+		Ga0059261_2546	0.13	+0.9
2,634,615	+		Ga0059261_2546	0.13	+0.3
2,634,615	+		Ga0059261_2546	0.13	-0.2
2,634,615	+		Ga0059261_2546	0.13	-0.6
2,634,615	+		Ga0059261_2546	0.13	+0.4
2,634,615	+		Ga0059261_2546	0.13	+0.7
2,634,615	+		Ga0059261_2546	0.13	-0.2
2,634,615	+		Ga0059261_2546	0.13	-0.4
2,634,615	+				+1.3
2,634,615	+		Ga0059261_2546	0.13	+0.3
2,634,615	+		Ga0059261_2546	0.13	+0.0
2,634,615	+		Ga0059261_2546	0.13	+0.1
2,634,615	+		Ga0059261_2546	0.13	+0.4
2,634,615	+		Ga0059261_2546	0.13	-0.5
2,634,615	+		Ga0059261_2546	0.13	-0.1
2,634,615	+		Ga0059261_2546	0.13	-0.7
2,634,615	+		Ga0059261_2546	0.13	+0.4
2,634,616	-		Ga0059261_2546	0.14	-0.2
2,634,616	-		Ga0059261_2546	0.14	-0.3
2,634,616	-		Ga0059261_2546	0.14	+0.9
2,634,616	-		Ga0059261_2546	0.14	+0.9
2,634,616	-		Ga0059261_2546	0.14	+0.5
2,634,616	-		Ga0059261_2546	0.14	-0.5
2,634,616	-		Ga0059261_2546	0.14	-0.8
2,634,616	-		Ga0059261_2546	0.14	+0.9
2,634,616	-		Ga0059261_2546	0.14	-2.8
2,634,616	-		Ga0059261_2546	0.14	-0.2
2,634,616	-		Ga0059261_2546	0.14	+0.2
2,634,616	-		Ga0059261_2546	0.14	+1.0
2,634,616	-		Ga0059261_2546	0.14	+0.4
2,634,616	-		Ga0059261_2546	0.14	-0.4
2,634,616	-		Ga0059261_2546	0.14	+0.3
2,634,616	-		Ga0059261_2546	0.14	-0.2
2,634,616	-		Ga0059261_2546	0.14	+0.1
2,634,616	-		Ga0059261_2546	0.14	-1.4
2,634,616	-		Ga0059261_2546	0.14	+0.3
2,634,616	-		Ga0059261_2546	0.14	-0.5
2,634,616	-		Ga0059261_2546	0.14	-1.0
2,635,078	+		Ga0059261_2546	0.83	+0.1
2,635,078	+		Ga0059261_2546	0.83	-0.1
2,635,078	+		Ga0059261_2546	0.83	-0.6
2,635,078	+		Ga0059261_2546	0.83	+2.3
2,635,078	+		Ga0059261_2546	0.83	+0.2
2,635,078	+		Ga0059261_2546	0.83	+0.2
2,635,078	+		Ga0059261_2546	0.83	-0.8
2,635,078	+		Ga0059261_2546	0.83	+0.4
2,635,078	+		Ga0059261_2546	0.83	+0.2
2,635,079	-		Ga0059261_2546	0.83	+1.0
2,635,079	-		Ga0059261_2546	0.83	-0.6
2,635,079	-		Ga0059261_2546	0.83	-0.4
2,635,079	-		Ga0059261_2546	0.83	+0.1
2,635,079	-		Ga0059261_2546	0.83	-0.1
2,635,079	-		Ga0059261_2546	0.83	-0.5
2,635,079	-		Ga0059261_2546	0.83	-0.2
2,635,095	+		Ga0059261_2546	0.86	-0.6
2,635,095	+		Ga0059261_2546	0.86	+0.4
2,635,095	+		Ga0059261_2546	0.86	-0.2
2,635,096	-		Ga0059261_2546	0.86	-0.6
2,635,138	+				-0.5
2,635,138	+				+0.0
2,635,138	+				+1.0
2,635,138	+				-0.6
2,635,138	+				-0.2
2,635,138	+				-0.3
2,635,186	+				+0.3
2,635,215	+				-0.5
2,635,215	+				+1.0
2,635,215	+				-0.3
2,635,216	-				+0.6
2,635,253	-				-1.0
2,635,253	-		Ga0059261_2547	0.27	-0.2
2,635,318	+				-0.0
2,635,319	-				-0.9
2,635,334	+				-1.3
2,635,397	+				+0.1
2,635,398	-				+0.4
2,635,398	-				-0.7
2,635,398	-				-2.6
2,635,406	+				+0.8
2,635,407	-				+0.5
2,635,411	+				-0.4
2,635,411	+				-0.8
2,635,412	-				+0.1
2,635,412	-				+0.0
2,635,412	-				-1.0
2,635,440	+				+1.2
2,635,488	+				+0.1
2,635,511	+				-0.4
2,635,511	+				+0.9
2,635,511	+				+0.2
2,635,512	-		Ga0059261_2548	0.10	-0.0
2,635,512	-		Ga0059261_2548	0.10	+0.0
2,635,525	-		Ga0059261_2548	0.27	+0.6
2,635,609	+				-0.3
2,635,609	+				-0.9
2,635,609	+				+0.4
2,635,610	-				-0.7
2,635,610	-				-0.4
2,635,610	-				-0.2
2,635,610	-				-0.5
2,635,640	+				+0.2
2,635,641	-				+0.0
2,635,658	-				-0.3
2,635,687	+				-0.4
2,635,687	+				+1.8
2,635,687	+				+1.6
2,635,687	+				-0.9
2,635,687	+				-0.2
2,635,687	+				+0.7
2,635,687	+				+0.1
2,635,687	+				+1.3
2,635,688	-				-0.3
2,635,688	-				-0.5
2,635,688	-				-0.0
2,635,688	-				+0.1
2,635,688	-				+1.0
2,635,740	-				-0.4
2,635,757	-				-0.0
2,635,878	+				+0.1
2,635,878	+				-0.6
2,635,878	+				-0.3
2,635,879	-				+2.0
2,635,879	-				-0.6
2,635,879	-				-1.0
2,635,972	+				-0.7
2,635,981	+				-0.8
2,635,981	+				-0.6
2,635,982	-				+2.4
2,635,982	-				+0.3
2,635,982	-				-0.1
2,635,982	-				-0.4
2,635,982	-				-0.1
2,635,982	-				-0.4
2,635,996	+				+0.7
2,635,996	+				+0.3
2,636,009	+				-0.6
2,636,009	+				-1.0
2,636,009	+				-0.6
2,636,009	+				-0.2
2,636,010	-				+0.9
2,636,010	-				-0.2
2,636,071	+				-0.1
2,636,071	+				+0.7
2,636,071	+				-0.4
2,636,071	+				-1.0
2,636,071	+				-0.2
2,636,071	+				+0.5
2,636,071	+				+0.7
2,636,072	-				+0.0
2,636,072	-				+0.1
2,636,072	-				+0.5
2,636,072	-				-0.8
2,636,072	-				-0.2
2,636,072	-				-1.9
2,636,072	-				-0.7
2,636,072	-				-0.1
2,636,073	+				+0.4
2,636,073	+				+0.7
2,636,073	+				-0.2
2,636,074	-				-0.8
2,636,074	-				+0.3
2,636,074	-				+0.0
2,636,074	-				+1.9
2,636,074	-				-0.3
2,636,135	+		Ga0059261_2549	0.12	-1.0
2,636,135	+		Ga0059261_2549	0.12	-0.3
2,636,135	+		Ga0059261_2549	0.12	+0.9
2,636,135	+		Ga0059261_2549	0.12	-0.0
2,636,135	+		Ga0059261_2549	0.12	-0.1
2,636,135	+		Ga0059261_2549	0.12	-0.4
2,636,135	+		Ga0059261_2549	0.12	+0.3
2,636,135	+		Ga0059261_2549	0.12	+0.5
2,636,136	-		Ga0059261_2549	0.12	+0.6
2,636,136	-		Ga0059261_2549	0.12	+1.0
2,636,136	-		Ga0059261_2549	0.12	-0.6
2,636,136	-		Ga0059261_2549	0.12	-0.5
2,636,136	-		Ga0059261_2549	0.12	-1.0
2,636,141	+		Ga0059261_2549	0.13	-0.3
2,636,141	+		Ga0059261_2549	0.13	-1.0
2,636,141	+		Ga0059261_2549	0.13	-0.1
2,636,141	+		Ga0059261_2549	0.13	-0.2
2,636,141	+		Ga0059261_2549	0.13	+0.3
2,636,141	+		Ga0059261_2549	0.13	-0.9
2,636,141	+		Ga0059261_2549	0.13	+1.0
2,636,141	+		Ga0059261_2549	0.13	-0.7
2,636,141	+		Ga0059261_2549	0.13	-0.3
2,636,141	+		Ga0059261_2549	0.13	-0.3
2,636,141	+		Ga0059261_2549	0.13	+0.5
2,636,142	-		Ga0059261_2549	0.13	+0.1
2,636,142	-		Ga0059261_2549	0.13	-0.1
2,636,142	-		Ga0059261_2549	0.13	+0.2
2,636,142	-		Ga0059261_2549	0.13	-1.3
2,636,169	+		Ga0059261_2549	0.15	+0.6
2,636,169	+		Ga0059261_2549	0.15	-0.7
2,636,225	+		Ga0059261_2549	0.20	+0.2
2,636,225	+		Ga0059261_2549	0.20	-0.2
2,636,225	+		Ga0059261_2549	0.20	-0.4
2,636,225	+		Ga0059261_2549	0.20	-0.6
2,636,226	-		Ga0059261_2549	0.20	+0.5
2,636,226	-		Ga0059261_2549	0.20	-0.3
2,636,226	-		Ga0059261_2549	0.20	-0.8
2,636,226	-		Ga0059261_2549	0.20	+0.0
2,636,226	-		Ga0059261_2549	0.20	+0.2
2,636,250	-		Ga0059261_2549	0.22	-0.4
2,636,259	+		Ga0059261_2549	0.23	-2.0
2,636,259	+		Ga0059261_2549	0.23	-0.1
2,636,260	-				+1.0
2,636,260	-		Ga0059261_2549	0.23	+0.7
2,636,260	-		Ga0059261_2549	0.23	-0.7
2,636,260	-		Ga0059261_2549	0.23	-0.6
2,636,260	-		Ga0059261_2549	0.23	-0.3
2,636,260	-		Ga0059261_2549	0.23	-0.1
2,636,260	-		Ga0059261_2549	0.23	-0.7
2,636,260	-		Ga0059261_2549	0.23	+0.2
2,636,260	-		Ga0059261_2549	0.23	-0.2
2,636,270	+		Ga0059261_2549	0.24	-0.8
2,636,270	+		Ga0059261_2549	0.24	-0.8
2,636,270	+		Ga0059261_2549	0.24	+0.3
2,636,271	-		Ga0059261_2549	0.24	+0.7
2,636,271	-		Ga0059261_2549	0.24	-0.6
2,636,271	-		Ga0059261_2549	0.24	+0.5
2,636,281	+		Ga0059261_2549	0.25	-0.5
2,636,282	-		Ga0059261_2549	0.25	+0.4
2,636,283	+		Ga0059261_2549	0.25	+0.0
2,636,283	+		Ga0059261_2549	0.25	-0.1
2,636,283	+		Ga0059261_2549	0.25	-0.3
2,636,283	+		Ga0059261_2549	0.25	+0.4
2,636,283	+		Ga0059261_2549	0.25	+0.5
2,636,283	+		Ga0059261_2549	0.25	+0.0
2,636,283	+		Ga0059261_2549	0.25	+0.4
2,636,283	+		Ga0059261_2549	0.25	-1.0
2,636,284	-		Ga0059261_2549	0.25	+0.1
2,636,284	-		Ga0059261_2549	0.25	+0.1
2,636,284	-		Ga0059261_2549	0.25	+0.4
2,636,284	-		Ga0059261_2549	0.25	-0.1
2,636,284	-		Ga0059261_2549	0.25	+1.6
2,636,284	-		Ga0059261_2549	0.25	-0.6
2,636,342	+		Ga0059261_2549	0.30	-0.1
2,636,343	-		Ga0059261_2549	0.30	-1.2
2,636,422	+		Ga0059261_2549	0.37	+1.0
2,636,422	+		Ga0059261_2549	0.37	+0.0
2,636,423	-		Ga0059261_2549	0.37	+0.0
2,636,423	-		Ga0059261_2549	0.37	+0.4
2,636,423	-		Ga0059261_2549	0.37	-0.4
2,636,480	+		Ga0059261_2549	0.42	+0.4
2,636,480	+		Ga0059261_2549	0.42	+0.4
2,636,480	+		Ga0059261_2549	0.42	-0.6
2,636,480	+		Ga0059261_2549	0.42	+0.5
2,636,480	+		Ga0059261_2549	0.42	+1.0
2,636,480	+		Ga0059261_2549	0.42	-0.3
2,636,480	+		Ga0059261_2549	0.42	-0.3
2,636,480	+		Ga0059261_2549	0.42	+0.1
2,636,480	+		Ga0059261_2549	0.42	+1.0
2,636,480	+		Ga0059261_2549	0.42	+0.2
2,636,480	+		Ga0059261_2549	0.42	+0.7
2,636,480	+		Ga0059261_2549	0.42	+0.7
2,636,481	-		Ga0059261_2549	0.42	+0.1
2,636,481	-		Ga0059261_2549	0.42	-1.1
2,636,481	-		Ga0059261_2549	0.42	-1.3
2,636,481	-		Ga0059261_2549	0.42	-0.4
2,636,481	-		Ga0059261_2549	0.42	+0.3
2,636,481	-		Ga0059261_2549	0.42	+0.4
2,636,481	-		Ga0059261_2549	0.42	+0.6
2,636,481	-		Ga0059261_2549	0.42	+0.4
2,636,481	-		Ga0059261_2549	0.42	-0.5
2,636,481	-		Ga0059261_2549	0.42	-0.1
2,636,482	+		Ga0059261_2549	0.42	-0.3
2,636,482	+		Ga0059261_2549	0.42	+0.2
2,636,482	+		Ga0059261_2549	0.42	+0.4
2,636,482	+		Ga0059261_2549	0.42	+0.9
2,636,482	+		Ga0059261_2549	0.42	-0.7
2,636,482	+				+2.0
2,636,482	+		Ga0059261_2549	0.42	-0.4
2,636,482	+		Ga0059261_2549	0.42	+0.4
2,636,482	+		Ga0059261_2549	0.42	+0.3
2,636,483	-		Ga0059261_2549	0.42	-0.0
2,636,483	-		Ga0059261_2549	0.42	+0.4
2,636,483	-		Ga0059261_2549	0.42	-0.3
2,636,483	-		Ga0059261_2549	0.42	+0.2
2,636,483	-		Ga0059261_2549	0.42	+0.2