Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03635

Experiment: PYE with Dimethyl Sulfoxide 7.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 7.5 vol%
3,788,201	-				-1.5
3,788,224	+				-0.7
3,788,224	+				+0.2
3,788,224	+				+0.9
3,788,243	+				+0.5
3,788,251	-				-1.3
3,788,251	-				-1.9
3,788,251	-				+0.9
3,788,251	-				-0.5
3,788,256	-				-0.7
3,788,261	-				-0.1
3,788,303	+				-0.9
3,788,311	-				-1.5
3,788,330	-				-2.4
3,788,373	+				-0.7
3,788,376	-				-0.9
3,788,390	-				+0.4
3,788,432	+				+0.3
3,788,440	-				+0.9
3,788,455	-				-0.1
3,788,475	-		CCNA_03634	0.13	+0.5
3,788,487	+		CCNA_03634	0.15	+1.1
3,788,490	-		CCNA_03634	0.16	+0.6
3,788,490	-		CCNA_03634	0.16	+1.0
3,788,492	+		CCNA_03634	0.16	+0.3
3,788,500	-		CCNA_03634	0.17	+1.0
3,788,500	-		CCNA_03634	0.17	+0.5
3,788,500	-		CCNA_03634	0.17	+1.1
3,788,531	-		CCNA_03634	0.23	-0.9
3,788,534	+		CCNA_03634	0.23	-0.3
3,788,554	+		CCNA_03634	0.26	-2.5
3,788,559	+		CCNA_03634	0.27	-0.1
3,788,576	+		CCNA_03634	0.30	+1.9
3,788,599	-		CCNA_03634	0.34	+0.6
3,788,599	-		CCNA_03634	0.34	+0.3
3,788,610	+		CCNA_03634	0.36	-2.2
3,788,644	-		CCNA_03634	0.42	-0.2
3,788,651	+		CCNA_03634	0.43	+0.8
3,788,653	+		CCNA_03634	0.43	+1.9
3,788,659	-		CCNA_03634	0.44	+0.7
3,788,702	+		CCNA_03634	0.51	-0.2
3,788,702	+		CCNA_03634	0.51	+0.4
3,788,725	+		CCNA_03634	0.55	+1.9
3,788,733	-		CCNA_03634	0.57	+0.3
3,788,733	-		CCNA_03634	0.57	-0.3
3,788,738	-		CCNA_03634	0.57	-0.8
3,788,778	-		CCNA_03634	0.64	-0.2
3,788,793	-		CCNA_03634	0.67	-0.6
3,788,821	+		CCNA_03634	0.71	+0.1
3,788,821	+		CCNA_03634	0.71	-0.9
3,788,829	-		CCNA_03634	0.73	+0.9
3,788,829	-		CCNA_03634	0.73	-1.4
3,788,829	-		CCNA_03634	0.73	-1.0
3,788,923	+		CCNA_03634	0.89	+0.3
3,788,931	-				-0.6
3,788,933	-				+0.9
3,788,933	-				+1.1
3,788,946	+				-1.6
3,788,954	-				-0.7
3,788,954	-				+0.9
3,788,954	-				+0.5
3,788,954	-				+1.6
3,788,991	-				-0.4
3,788,993	+				-0.4
3,788,993	-				+0.5
3,789,027	+				+0.9
3,789,126	+				-0.6
3,789,126	+				-0.6
3,789,150	+		CCNA_03635	0.13	+3.1
3,789,429	+		CCNA_03635	0.87	-0.7
3,789,434	+		CCNA_03635	0.88	+2.2
3,789,446	+				-0.9
3,789,491	+				-1.3
3,789,504	+				-0.3
3,789,532	-				+1.7
3,789,579	+				-0.2
3,789,579	+				+0.7
3,789,587	-				+1.8
3,789,587	-				+2.3
3,789,587	-				+1.3
3,789,587	-				+1.3
3,789,587	-				+1.9
3,789,592	-				+1.8
3,789,597	-				+1.7
3,789,608	+				+1.4
3,789,608	+				+0.5
3,789,608	+				-0.9
3,789,628	-				+1.2
3,789,648	-				+0.8
3,789,648	-				+2.1
3,789,684	+				+2.9
3,789,686	+				+0.3
3,789,694	-				+1.8
3,789,694	-				+1.9
3,789,746	-				+1.4
3,789,750	+				-1.1
3,789,790	-				+2.2
3,789,817	-		CCNA_03636	0.12	+2.7
3,789,841	-		CCNA_03636	0.15	+2.1
3,789,866	-		CCNA_03636	0.17	+2.0
3,789,878	+		CCNA_03636	0.18	+0.2
3,789,878	+		CCNA_03636	0.18	-1.5
3,789,910	+		CCNA_03636	0.22	+0.5
3,789,924	-		CCNA_03636	0.23	+2.2
3,789,948	-		CCNA_03636	0.25	+2.1
3,790,047	+		CCNA_03636	0.35	+0.6
3,790,139	+		CCNA_03636	0.44	+0.9
3,790,181	-		CCNA_03636	0.48	+1.7
3,790,186	+		CCNA_03636	0.48	+0.6
3,790,186	+		CCNA_03636	0.48	-1.1
3,790,186	+		CCNA_03636	0.48	+2.2
3,790,194	-		CCNA_03636	0.49	+1.5
3,790,194	-		CCNA_03636	0.49	+1.5
3,790,194	-		CCNA_03636	0.49	+1.0
3,790,271	+		CCNA_03636	0.57	+0.9
3,790,278	+		CCNA_03636	0.57	-1.3
3,790,278	+		CCNA_03636	0.57	-1.6
3,790,286	-		CCNA_03636	0.58	+1.0
3,790,286	-		CCNA_03636	0.58	+1.9
3,790,288	+		CCNA_03636	0.58	-0.6
3,790,291	-		CCNA_03636	0.59	+0.8
3,790,296	-		CCNA_03636	0.59	+0.6
3,790,296	-		CCNA_03636	0.59	+2.0
3,790,299	+		CCNA_03636	0.59	+0.9
3,790,304	+		CCNA_03636	0.60	+0.0
3,790,322	-		CCNA_03636	0.62	+0.9
3,790,328	+		CCNA_03636	0.62	-0.7
3,790,336	+		CCNA_03636	0.63	-1.5
3,790,362	+		CCNA_03636	0.66	+0.4
3,790,423	-		CCNA_03636	0.72	+1.3