Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01779

Experiment: PYE with Dimethyl Sulfoxide 7.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 7.5 vol%
1,905,566	-		CCNA_01778	0.28	-1.1
1,905,667	+		CCNA_01778	0.36	-1.0
1,905,667	+		CCNA_01778	0.36	+0.8
1,905,667	+		CCNA_01778	0.36	-0.1
1,905,667	+		CCNA_01778	0.36	+0.7
1,905,667	+		CCNA_01778	0.36	+1.6
1,905,667	+		CCNA_01778	0.36	+2.5
1,905,675	-		CCNA_01778	0.36	+0.2
1,905,675	-		CCNA_01778	0.36	+0.2
1,905,704	-		CCNA_01778	0.39	+0.2
1,905,725	+		CCNA_01778	0.40	-0.2
1,905,727	+		CCNA_01778	0.40	-0.2
1,905,740	-		CCNA_01778	0.41	-0.5
1,905,761	+		CCNA_01778	0.43	+1.3
1,905,827	+		CCNA_01778	0.48	+2.2
1,905,854	-		CCNA_01778	0.50	+1.9
1,905,882	+		CCNA_01778	0.52	+1.8
1,905,887	+		CCNA_01778	0.53	+3.7
1,905,897	+		CCNA_01778	0.54	+0.2
1,905,897	+		CCNA_01778	0.54	+0.3
1,905,897	+		CCNA_01778	0.54	+0.9
1,905,897	+		CCNA_01778	0.54	+1.4
1,905,897	+		CCNA_01778	0.54	+1.4
1,905,897	+		CCNA_01778	0.54	+2.4
1,905,897	+		CCNA_01778	0.54	+1.5
1,905,897	+		CCNA_01778	0.54	+1.5
1,905,897	+		CCNA_01778	0.54	+1.5
1,905,897	+		CCNA_01778	0.54	+0.8
1,905,898	+		CCNA_01778	0.54	-0.1
1,905,905	-		CCNA_01778	0.54	-0.1
1,905,905	-		CCNA_01778	0.54	+1.5
1,905,905	-		CCNA_01778	0.54	-0.5
1,905,905	-		CCNA_01778	0.54	+0.2
1,905,905	-		CCNA_01778	0.54	+0.5
1,905,905	-		CCNA_01778	0.54	-1.5
1,905,905	-		CCNA_01778	0.54	-0.1
1,905,905	-		CCNA_01778	0.54	+1.9
1,905,905	-		CCNA_01778	0.54	-1.2
1,905,907	+		CCNA_01778	0.54	+2.5
1,905,915	-		CCNA_01778	0.55	-2.7
1,905,915	-				+2.5
1,905,932	+		CCNA_01778	0.56	+0.6
1,905,983	+		CCNA_01778	0.60	+1.8
1,906,005	-		CCNA_01778	0.62	-0.8
1,906,011	-		CCNA_01778	0.62	-0.1
1,906,019	-		CCNA_01778	0.63	-0.1
1,906,028	+		CCNA_01778	0.64	-0.4
1,906,134	+		CCNA_01778	0.72	-0.1
1,906,159	+		CCNA_01778	0.74	+2.7
1,906,159	+		CCNA_01778	0.74	+0.2
1,906,161	+		CCNA_01778	0.74	+1.5
1,906,200	+		CCNA_01778	0.77	+2.0
1,906,202	+		CCNA_01778	0.77	-0.1
1,906,220	+		CCNA_01778	0.79	+0.5
1,906,220	+		CCNA_01778	0.79	+1.9
1,906,220	+		CCNA_01778	0.79	-0.1
1,906,227	+		CCNA_01778	0.79	+1.5
1,906,241	-		CCNA_01778	0.80	-0.6
1,906,248	-		CCNA_01778	0.81	-0.7
1,906,253	-		CCNA_01778	0.81	-1.1
1,906,270	+		CCNA_01778	0.82	+1.4
1,906,351	+		CCNA_01778	0.89	+2.5
1,906,353	+		CCNA_01778	0.89	+0.3
1,906,359	+		CCNA_01778	0.89	+0.2
1,906,367	-				-0.3
1,906,369	-				-0.6
1,906,485	-				+0.1
1,906,500	+				+0.4
1,906,562	-		CCNA_01779	0.12	+2.5
1,906,567	+		CCNA_01779	0.14	+0.7
1,906,576	-		CCNA_01779	0.17	+1.6
1,906,627	-		CCNA_01779	0.36	+1.3
1,906,666	-		CCNA_01779	0.51	+2.1
1,906,694	-		CCNA_01779	0.61	+1.2
1,906,694	-		CCNA_01779	0.61	+1.0
1,906,699	-		CCNA_01779	0.63	+0.0
1,906,746	+		CCNA_01779	0.80	-0.7
1,906,773	-				+1.3
1,906,779	+				-1.8
1,906,787	-				+1.5
1,906,802	+				-0.7
1,906,802	+				-1.2
1,906,808	-				-0.2
1,906,841	+				+0.5
1,906,843	-				-1.1
1,906,961	+				+0.8
1,906,974	-				+1.9
1,906,974	-				+1.6
1,907,052	+				+1.4
1,907,089	-				+2.5
1,907,109	+		CCNA_01780	0.10	+2.7
1,907,109	-		CCNA_01780	0.10	+3.3
1,907,117	-		CCNA_01780	0.11	+3.0
1,907,186	+		CCNA_01780	0.15	+2.9
1,907,189	-		CCNA_01780	0.16	+2.8
1,907,209	+		CCNA_01780	0.17	+2.0
1,907,284	+		CCNA_01780	0.22	+2.7
1,907,306	+		CCNA_01780	0.23	+1.4
1,907,306	+		CCNA_01780	0.23	+2.2
1,907,336	-		CCNA_01780	0.25	+2.2
1,907,430	+		CCNA_01780	0.32	+1.4
1,907,498	-		CCNA_01780	0.36	+2.0
1,907,512	+		CCNA_01780	0.37	+1.4
1,907,520	-		CCNA_01780	0.38	+2.5
1,907,521	-		CCNA_01780	0.38	+3.0
1,907,555	+		CCNA_01780	0.40	+0.9
1,907,563	-		CCNA_01780	0.41	+1.9
1,907,648	+		CCNA_01780	0.46	+1.8
1,907,656	-		CCNA_01780	0.47	+2.6
1,907,661	-				+3.1
1,907,694	+		CCNA_01780	0.49	+2.1
1,907,705	+		CCNA_01780	0.50	+0.8
1,907,713	-		CCNA_01780	0.51	+2.8
1,907,737	+		CCNA_01780	0.52	+2.9
1,907,737	+		CCNA_01780	0.52	+1.8
1,907,748	+		CCNA_01780	0.53	+1.9