Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01531

Experiment: PYE with Dimethyl Sulfoxide 7.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 7.5 vol%
1,637,745	-				-0.2
1,637,827	+				+2.3
1,637,885	+				+0.8
1,637,922	+				+3.2
1,637,922	+				+2.1
1,637,931	-		CCNA_01530	0.11	-1.1
1,637,943	+		CCNA_01530	0.12	+1.2
1,637,961	+		CCNA_01530	0.14	+2.3
1,637,961	+		CCNA_01530	0.14	+2.4
1,637,969	-		CCNA_01530	0.15	-1.6
1,637,969	-		CCNA_01530	0.15	+0.3
1,637,974	-		CCNA_01530	0.16	+1.1
1,638,000	-		CCNA_01530	0.19	-1.4
1,638,026	-		CCNA_01530	0.22	-0.7
1,638,028	+		CCNA_01530	0.22	+1.7
1,638,038	-		CCNA_01530	0.24	-0.2
1,638,038	-		CCNA_01530	0.24	+1.1
1,638,066	+		CCNA_01530	0.27	+1.5
1,638,092	-		CCNA_01530	0.30	-0.2
1,638,103	+		CCNA_01530	0.31	+1.7
1,638,111	-		CCNA_01530	0.32	-1.4
1,638,140	+		CCNA_01530	0.36	+2.4
1,638,152	+		CCNA_01530	0.37	+2.2
1,638,152	+		CCNA_01530	0.37	+0.3
1,638,152	+		CCNA_01530	0.37	+1.8
1,638,152	+		CCNA_01530	0.37	+2.0
1,638,164	+		CCNA_01530	0.39	+0.8
1,638,170	+		CCNA_01530	0.39	+0.7
1,638,185	+		CCNA_01530	0.41	+2.8
1,638,185	+		CCNA_01530	0.41	+2.4
1,638,185	+		CCNA_01530	0.41	+0.7
1,638,192	+		CCNA_01530	0.42	+2.1
1,638,193	-		CCNA_01530	0.42	+0.8
1,638,193	-		CCNA_01530	0.42	-1.6
1,638,193	-		CCNA_01530	0.42	-2.8
1,638,214	-		CCNA_01530	0.45	+1.7
1,638,231	+		CCNA_01530	0.47	+1.3
1,638,239	-		CCNA_01530	0.48	-3.0
1,638,241	+		CCNA_01530	0.48	+1.5
1,638,241	+		CCNA_01530	0.48	+2.1
1,638,241	+		CCNA_01530	0.48	+1.3
1,638,281	-		CCNA_01530	0.53	-0.9
1,638,315	+		CCNA_01530	0.57	+2.5
1,638,316	+		CCNA_01530	0.57	+2.9
1,638,318	-		CCNA_01530	0.57	-0.2
1,638,322	-		CCNA_01530	0.57	+0.4
1,638,322	-		CCNA_01530	0.57	-0.5
1,638,324	-		CCNA_01530	0.58	+2.4
1,638,325	+		CCNA_01530	0.58	+2.0
1,638,350	+		CCNA_01530	0.61	+1.8
1,638,350	+		CCNA_01530	0.61	+2.0
1,638,357	+		CCNA_01530	0.62	+3.5
1,638,378	+		CCNA_01530	0.64	+1.9
1,638,416	+		CCNA_01530	0.69	+2.0
1,638,426	+		CCNA_01530	0.70	+2.0
1,638,428	+		CCNA_01530	0.70	+1.0
1,638,429	-		CCNA_01530	0.70	-0.4
1,638,434	-		CCNA_01530	0.71	+0.4
1,638,458	+		CCNA_01530	0.74	+2.0
1,638,489	+		CCNA_01530	0.77	+2.1
1,638,489	+		CCNA_01530	0.77	+1.9
1,638,509	+		CCNA_01530	0.80	+1.8
1,638,509	+		CCNA_01530	0.80	+1.2
1,638,517	-		CCNA_01530	0.81	-1.5
1,638,517	-		CCNA_01530	0.81	-0.6
1,638,521	+		CCNA_01530	0.81	+1.1
1,638,522	+		CCNA_01530	0.81	+2.0
1,638,538	+		CCNA_01530	0.83	+2.0
1,638,566	+		CCNA_01530	0.87	+1.6
1,638,578	+		CCNA_01530	0.88	+1.6
1,638,578	+		CCNA_01530	0.88	+1.9
1,638,578	+		CCNA_01530	0.88	+2.0
1,638,586	-		CCNA_01530	0.89	+0.1
1,638,613	+				+1.8
1,638,618	+				+1.8
1,638,621	-				+1.6
1,638,621	-				+1.4
1,638,631	-				-1.8
1,638,662	+				+2.1
1,638,662	+				+2.0
1,638,662	+				+2.0
1,638,670	-				-0.6
1,638,670	-				+1.7
1,638,678	+				+2.4
1,638,678	+				+1.0
1,638,686	-				+1.4
1,638,700	+				+1.1
1,638,703	-				-1.0
1,638,708	-				-0.8
1,638,739	+				+2.6
1,638,739	+				+2.2
1,638,744	+				+2.1
1,638,812	+		CCNA_01531	0.12	+0.8
1,638,839	+		CCNA_01531	0.17	+0.9
1,638,839	+		CCNA_01531	0.17	+1.7
1,638,847	-		CCNA_01531	0.19	-1.6
1,638,863	+		CCNA_01531	0.22	+2.1
1,638,868	+		CCNA_01531	0.23	+1.4
1,638,929	+		CCNA_01531	0.34	+2.4
1,638,930	+		CCNA_01531	0.34	+1.8
1,638,953	+		CCNA_01531	0.38	+2.2
1,638,961	-		CCNA_01531	0.39	+0.9
1,639,042	+		CCNA_01531	0.54	+0.9
1,639,042	+		CCNA_01531	0.54	+1.7
1,639,042	+		CCNA_01531	0.54	+1.0
1,639,042	+		CCNA_01531	0.54	+0.9
1,639,070	+		CCNA_01531	0.59	+2.0
1,639,075	+		CCNA_01531	0.60	+1.9
1,639,076	+		CCNA_01531	0.60	+0.4
1,639,099	+		CCNA_01531	0.64	+1.5
1,639,099	+		CCNA_01531	0.64	+1.3
1,639,121	+		CCNA_01531	0.68	+2.1
1,639,178	+		CCNA_01531	0.78	+0.6
1,639,178	+		CCNA_01531	0.78	+1.7
1,639,203	+		CCNA_01531	0.83	+1.5
1,639,213	+		CCNA_01531	0.85	+0.5
1,639,227	+		CCNA_01531	0.87	+1.5
1,639,235	-		CCNA_01531	0.89	-0.4
1,639,236	+		CCNA_01531	0.89	+1.6
1,639,236	+		CCNA_01531	0.89	+1.2
1,639,236	+		CCNA_01531	0.89	+1.7
1,639,244	-				+1.1
1,639,244	-				+0.8
1,639,246	+				+2.2
1,639,254	-				+0.8
1,639,276	-				-0.6
1,639,278	-				-1.2
1,639,282	+				+1.8
1,639,282	+				+2.4
1,639,282	+				+2.9
1,639,303	+				+2.1
1,639,303	+				+1.8
1,639,330	+				+2.6
1,639,336	+				+2.5
1,639,336	+				+2.4
1,639,336	+				+2.3
1,639,337	+				+2.7
1,639,337	+				+2.6
1,639,344	-				+1.4
1,639,344	-				-0.4
1,639,344	-				+1.4
1,639,345	-				-1.9
1,639,371	-				-1.8
1,639,371	-				-0.1
1,639,371	-				-0.2
1,639,403	+				+1.7
1,639,408	+				+1.7
1,639,416	-				+0.1
1,639,418	+				+0.9
1,639,428	+				+1.3
1,639,428	+				+3.0
1,639,430	+				+0.8
1,639,475	+				-0.2
1,639,483	-				-1.3
1,639,483	-				+0.3
1,639,504	+				+1.5
1,639,506	-				-0.0
1,639,516	-				-0.6
1,639,516	-				-2.2
1,639,538	+				+2.1
1,639,538	+				+0.2
1,639,546	-				+1.1
1,639,556	-				-2.6
1,639,556	-				-0.9
1,639,558	+				+1.3
1,639,578	+				-1.1
1,639,586	-				-2.4
1,639,636	-				+0.1
1,639,644	-				+1.7
1,639,644	-				+0.4
1,639,655	-				-1.5
1,639,656	+				+1.1
1,639,684	+		CCNA_01532	0.11	+0.7
1,639,688	+		CCNA_01532	0.11	-0.1
1,639,688	-		CCNA_01532	0.11	+1.4
1,639,725	+		CCNA_01532	0.12	+1.8
1,639,725	+		CCNA_01532	0.12	+1.6
1,639,725	+		CCNA_01532	0.12	+1.6
1,639,725	+		CCNA_01532	0.12	+0.9
1,639,725	+		CCNA_01532	0.12	+0.9
1,639,733	-		CCNA_01532	0.12	-0.2
1,639,733	-		CCNA_01532	0.12	+0.5
1,639,733	-				+0.4
1,639,733	-		CCNA_01532	0.12	-1.1
1,639,733	-		CCNA_01532	0.12	-1.1
1,639,748	+		CCNA_01532	0.13	-0.2
1,639,761	+		CCNA_01532	0.13	+1.1
1,639,761	+		CCNA_01532	0.13	+1.0
1,639,761	+		CCNA_01532	0.13	-3.0
1,639,764	-		CCNA_01532	0.14	-0.9
1,639,769	-		CCNA_01532	0.14	+0.8
1,639,769	-		CCNA_01532	0.14	+1.6
1,639,769	-		CCNA_01532	0.14	-0.4
1,639,769	-		CCNA_01532	0.14	-0.8
1,639,769	-		CCNA_01532	0.14	-1.8
1,639,769	-		CCNA_01532	0.14	-0.8
1,639,779	+		CCNA_01532	0.14	-0.5
1,639,805	+		CCNA_01532	0.15	+1.5
1,639,806	+		CCNA_01532	0.15	+0.8
1,639,806	+		CCNA_01532	0.15	+0.7
1,639,806	+		CCNA_01532	0.15	+0.1
1,639,806	+		CCNA_01532	0.15	+1.8
1,639,806	+		CCNA_01532	0.15	+1.1
1,639,814	-		CCNA_01532	0.15	+0.1
1,639,814	-		CCNA_01532	0.15	-1.9
1,639,814	-		CCNA_01532	0.15	-0.9
1,639,856	-		CCNA_01532	0.17	-0.4
1,639,861	-		CCNA_01532	0.17	-1.1
1,639,871	+		CCNA_01532	0.17	+0.2
1,639,871	+		CCNA_01532	0.17	-0.1
1,639,872	-		CCNA_01532	0.17	-0.9
1,639,879	-		CCNA_01532	0.18	-0.6
1,639,879	-		CCNA_01532	0.18	+2.4
1,639,894	-		CCNA_01532	0.18	+0.1
1,639,907	+		CCNA_01532	0.18	+0.2
1,639,953	-		CCNA_01532	0.20	-1.8
1,639,957	+		CCNA_01532	0.20	-0.7
1,639,969	+		CCNA_01532	0.21	+0.8
1,639,969	+		CCNA_01532	0.21	+2.5
1,639,969	+		CCNA_01532	0.21	+0.7
1,639,977	-		CCNA_01532	0.21	+2.4
1,639,977	-		CCNA_01532	0.21	-0.8
1,639,977	-		CCNA_01532	0.21	-1.1
1,639,977	-		CCNA_01532	0.21	+0.6
1,639,977	-		CCNA_01532	0.21	+0.2
1,640,009	+		CCNA_01532	0.22	+1.0
1,640,017	-		CCNA_01532	0.22	-1.8
1,640,023	+		CCNA_01532	0.23	+1.8
1,640,039	+		CCNA_01532	0.23	+0.9
1,640,054	+		CCNA_01532	0.24	+0.9
1,640,054	+		CCNA_01532	0.24	-0.1
1,640,055	-		CCNA_01532	0.24	+2.2
1,640,059	+		CCNA_01532	0.24	+0.4
1,640,103	+		CCNA_01532	0.25	+0.6
1,640,106	-		CCNA_01532	0.25	+2.6
1,640,106	-		CCNA_01532	0.25	+1.4
1,640,108	+		CCNA_01532	0.26	+0.1
1,640,109	-		CCNA_01532	0.26	+2.6
1,640,111	-		CCNA_01532	0.26	+0.4
1,640,111	-		CCNA_01532	0.26	+2.4
1,640,111	-		CCNA_01532	0.26	+0.8
1,640,116	-		CCNA_01532	0.26	-1.5
1,640,116	-		CCNA_01532	0.26	-0.6
1,640,116	-		CCNA_01532	0.26	+1.8
1,640,116	-		CCNA_01532	0.26	-0.4
1,640,162	+		CCNA_01532	0.27	+0.2
1,640,166	+		CCNA_01532	0.28	-0.9
1,640,176	-		CCNA_01532	0.28	-0.6
1,640,189	+		CCNA_01532	0.28	+0.4
1,640,199	-		CCNA_01532	0.29	+1.4
1,640,199	-		CCNA_01532	0.29	-0.6
1,640,226	+		CCNA_01532	0.30	+1.0