Strain Fitness in Caulobacter crescentus NA1000 around CCNA_00946

Experiment: PYE with Dimethyl Sulfoxide 7.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 7.5 vol%
1,022,701	+		CCNA_00944	0.69	+2.6
1,022,712	+		CCNA_00944	0.70	+3.1
1,022,712	+		CCNA_00944	0.70	+2.3
1,022,829	-		CCNA_00944	0.80	-0.7
1,022,882	+		CCNA_00944	0.84	+2.5
1,022,891	-		CCNA_00944	0.85	-1.7
1,022,896	-		CCNA_00944	0.86	-0.9
1,022,897	-		CCNA_00944	0.86	+0.5
1,023,004	-				+0.5
1,023,047	-				+0.8
1,023,116	-		CCNA_00945	0.27	-0.8
1,023,137	+		CCNA_00945	0.29	+1.9
1,023,147	+		CCNA_00945	0.31	+2.3
1,023,188	+		CCNA_00945	0.36	+2.0
1,023,209	-				+0.1
1,023,213	-		CCNA_00945	0.40	-0.9
1,023,233	-		CCNA_00945	0.42	-1.1
1,023,248	+		CCNA_00945	0.45	+2.5
1,023,248	+		CCNA_00945	0.45	+1.8
1,023,249	+		CCNA_00945	0.45	+3.2
1,023,256	-		CCNA_00945	0.46	+0.3
1,023,256	-		CCNA_00945	0.46	+0.3
1,023,268	+		CCNA_00945	0.47	+2.1
1,023,301	-		CCNA_00945	0.52	-0.7
1,023,301	-		CCNA_00945	0.52	-1.0
1,023,301	-		CCNA_00945	0.52	-0.9
1,023,353	+				+4.1
1,023,392	+		CCNA_00945	0.64	+2.9
1,023,392	+		CCNA_00945	0.64	+2.5
1,023,404	+		CCNA_00945	0.66	+3.0
1,023,411	+		CCNA_00945	0.67	+2.5
1,023,413	-		CCNA_00945	0.67	+0.5
1,023,416	+		CCNA_00945	0.67	+2.4
1,023,426	+		CCNA_00945	0.69	+3.2
1,023,454	+		CCNA_00945	0.73	+2.5
1,023,471	-		CCNA_00945	0.75	+0.4
1,023,484	+		CCNA_00945	0.77	+2.2
1,023,517	-		CCNA_00945	0.81	-1.6
1,023,517	-		CCNA_00945	0.81	+0.3
1,023,520	+		CCNA_00945	0.82	+1.4
1,023,528	-		CCNA_00945	0.83	+1.1
1,023,528	-		CCNA_00945	0.83	-0.8
1,023,552	+		CCNA_00945	0.86	+2.3
1,023,561	+		CCNA_00945	0.87	+1.9
1,023,561	+		CCNA_00945	0.87	+2.2
1,023,561	+		CCNA_00945	0.87	+1.2
1,023,571	+		CCNA_00945	0.89	+1.7
1,023,592	+				+1.9
1,023,592	+				+2.0
1,023,600	-				-1.5
1,023,610	+				+2.8
1,023,629	-				-1.9
1,023,656	-				+0.1
1,023,672	+				+1.8
1,023,675	-				+2.1
1,023,688	+				+2.5
1,023,704	-				-0.9
1,023,707	+				+2.1
1,023,729	-				+0.1
1,023,746	+		CCNA_00946	0.12	+2.2
1,023,761	-		CCNA_00946	0.14	+1.1
1,023,841	+		CCNA_00946	0.26	+2.6
1,023,849	+		CCNA_00946	0.27	+2.3
1,023,849	+		CCNA_00946	0.27	+2.5
1,023,849	+		CCNA_00946	0.27	+2.4
1,023,849	-		CCNA_00946	0.27	-2.0
1,023,870	+		CCNA_00946	0.30	+2.6
1,023,900	-		CCNA_00946	0.34	-0.2
1,023,914	+		CCNA_00946	0.36	+2.4
1,023,917	-		CCNA_00946	0.37	+0.1
1,023,917	-		CCNA_00946	0.37	+2.1
1,023,917	-		CCNA_00946	0.37	-0.2
1,023,919	+		CCNA_00946	0.37	+2.2
1,023,919	+		CCNA_00946	0.37	+1.8
1,023,919	+		CCNA_00946	0.37	+1.1
1,023,922	-		CCNA_00946	0.38	-1.1
1,023,927	-		CCNA_00946	0.38	+0.5
1,023,927	-		CCNA_00946	0.38	-1.5
1,023,982	-		CCNA_00946	0.46	+1.1
1,023,985	-		CCNA_00946	0.47	-2.2
1,024,020	-		CCNA_00946	0.52	-1.8
1,024,088	+		CCNA_00946	0.62	+2.0
1,024,088	+		CCNA_00946	0.62	+1.0
1,024,088	+		CCNA_00946	0.62	+2.3
1,024,096	-		CCNA_00946	0.63	+0.9
1,024,101	-		CCNA_00946	0.64	-0.2
1,024,125	+		CCNA_00946	0.67	+1.6
1,024,132	+		CCNA_00946	0.68	+1.5
1,024,140	+		CCNA_00946	0.69	+1.0
1,024,150	+		CCNA_00946	0.71	+1.7
1,024,266	+		CCNA_00946	0.88	+1.2
1,024,300	+				+0.8
1,024,303	-				-0.5
1,024,343	+				+1.0
1,024,343	+				+0.8
1,024,343	+				+0.6
1,024,351	+				+2.7
1,024,353	-				-1.4
1,024,356	+				+1.1
1,024,359	-				+0.5
1,024,364	-				+0.3
1,024,393	+				+0.7
1,024,393	+				+0.6
1,024,455	+				+0.9
1,024,455	+				-2.1
1,024,455	+				+1.3
1,024,458	-				-0.9
1,024,460	+				+1.0
1,024,463	+				+1.4
1,024,463	-				-1.8
1,024,471	+				+0.9
1,024,498	+				+2.9
1,024,498	+				+2.2
1,024,503	+				+1.6
1,024,526	+				+0.8
1,024,555	-				+2.1
1,024,584	+				+2.1
1,024,584	+				+1.1
1,024,584	+				+1.9
1,024,592	-				+0.1
1,024,612	+				+2.3
1,024,622	+				+1.7
1,024,654	-				+2.1
1,024,666	-				-0.2
1,024,679	+		CCNA_00947	0.10	+2.1
1,024,711	+		CCNA_00947	0.12	+2.4
1,024,711	+		CCNA_00947	0.12	+2.4
1,024,711	+		CCNA_00947	0.12	+2.6
1,024,719	-		CCNA_00947	0.13	-0.4
1,024,730	+		CCNA_00947	0.13	+2.5
1,024,859	-		CCNA_00947	0.20	-0.7
1,024,877	+		CCNA_00947	0.22	+2.5
1,024,920	+		CCNA_00947	0.24	+2.1
1,024,925	+		CCNA_00947	0.24	+3.4
1,024,954	+		CCNA_00947	0.26	+2.3
1,024,954	+		CCNA_00947	0.26	+1.9
1,024,962	-		CCNA_00947	0.26	-0.2
1,024,993	-		CCNA_00947	0.28	-1.2
1,024,995	-		CCNA_00947	0.28	+0.1
1,025,028	-		CCNA_00947	0.30	+0.1
1,025,032	+		CCNA_00947	0.30	+3.0
1,025,064	+		CCNA_00947	0.32	+2.5
1,025,124	+		CCNA_00947	0.35	+2.2
1,025,126	+		CCNA_00947	0.36	+1.9
1,025,126	+		CCNA_00947	0.36	+2.1
1,025,126	+		CCNA_00947	0.36	+1.6
1,025,134	-		CCNA_00947	0.36	-0.7
1,025,136	+		CCNA_00947	0.36	+1.8
1,025,137	+		CCNA_00947	0.36	+2.5
1,025,137	+		CCNA_00947	0.36	+2.5
1,025,137	+		CCNA_00947	0.36	+2.4
1,025,142	-		CCNA_00947	0.36	+0.5
1,025,257	+		CCNA_00947	0.43	+2.2
1,025,280	+		CCNA_00947	0.44	+2.6
1,025,315	+		CCNA_00947	0.46	+2.2
1,025,323	+		CCNA_00947	0.47	+2.3
1,025,325	+		CCNA_00947	0.47	+2.5