Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_21920

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
4,904,586	+		AO356_21915	0.67	-0.5
4,904,696	+		AO356_21915	0.73	-0.4
4,904,697	-		AO356_21915	0.73	+0.7
4,904,697	-		AO356_21915	0.73	+0.9
4,904,737	-		AO356_21915	0.75	+0.9
4,904,737	-		AO356_21915	0.75	-0.4
4,904,784	+		AO356_21915	0.78	+0.6
4,904,785	-		AO356_21915	0.78	-0.1
4,904,808	+		AO356_21915	0.79	+0.4
4,904,808	+		AO356_21915	0.79	-0.5
4,904,808	+		AO356_21915	0.79	-0.8
4,904,808	+		AO356_21915	0.79	-0.3
4,904,808	+		AO356_21915	0.79	-0.7
4,904,809	-		AO356_21915	0.79	-0.2
4,904,875	-		AO356_21915	0.82	-0.4
4,904,875	-		AO356_21915	0.82	+0.8
4,904,913	-		AO356_21915	0.84	+0.8
4,904,913	-		AO356_21915	0.84	+0.5
4,904,974	-		AO356_21915	0.87	-0.2
4,905,021	+		AO356_21915	0.90	-1.1
4,905,021	+		AO356_21915	0.90	-0.5
4,905,021	+		AO356_21915	0.90	-0.3
4,905,021	+		AO356_21915	0.90	-0.7
4,905,022	-		AO356_21915	0.90	-0.0
4,905,137	+				+0.3
4,905,138	-				+0.5
4,905,211	+				+0.5
4,905,235	-				-0.8
4,905,239	+				+0.5
4,905,239	+				+0.9
4,905,239	+				-0.4
4,905,240	-				-0.3
4,905,303	+				+0.2
4,905,303	+				+0.3
4,905,303	+				+0.0
4,905,310	-				-0.5
4,905,310	-				-0.8
4,905,310	-				-0.1
4,905,320	+				-0.0
4,905,320	+				+0.0
4,905,321	-				+0.6
4,905,335	+				+0.2
4,905,335	+				-0.4
4,905,375	+				-0.9
4,905,376	-				+0.5
4,905,410	-				-0.3
4,905,410	-				-1.1
4,905,495	+				-0.0
4,905,495	+				-0.5
4,905,495	+				+0.5
4,905,496	-				-0.1
4,905,496	-				-0.1
4,905,498	+				+0.5
4,905,532	+				-0.0
4,905,532	+				-0.0
4,905,533	-				-0.5
4,905,556	-				-1.0
4,905,610	+				-0.2
4,905,610	+				+0.7
4,905,696	+		AO356_21920	0.18	-0.2
4,905,696	+		AO356_21920	0.18	-0.5
4,906,029	+		AO356_21920	0.50	+0.1
4,906,029	+		AO356_21920	0.50	-0.8
4,906,029	+		AO356_21920	0.50	-0.3
4,906,029	+		AO356_21920	0.50	+0.7
4,906,029	+		AO356_21920	0.50	+0.4
4,906,029	+		AO356_21920	0.50	+0.3
4,906,029	+		AO356_21920	0.50	-0.3
4,906,029	+		AO356_21920	0.50	-0.2
4,906,030	-		AO356_21920	0.50	-0.2
4,906,030	-		AO356_21920	0.50	+0.3
4,906,030	-		AO356_21920	0.50	-0.4
4,906,030	-		AO356_21920	0.50	-0.8
4,906,261	+		AO356_21920	0.72	-0.5
4,906,261	+		AO356_21920	0.72	+0.9
4,906,261	+		AO356_21920	0.72	-0.4
4,906,261	+		AO356_21920	0.72	+0.4
4,906,262	-		AO356_21920	0.72	-0.2
4,906,365	+		AO356_21920	0.82	-0.4
4,906,368	+		AO356_21920	0.82	-0.6
4,906,368	+		AO356_21920	0.82	+0.8
4,906,369	-		AO356_21920	0.82	-1.2
4,906,515	+				+0.6
4,906,515	+				-0.0
4,906,516	-				-0.1
4,906,516	-				-1.6
4,906,739	+		AO356_21925	0.24	-0.0
4,906,740	-		AO356_21925	0.24	-1.0
4,906,740	-		AO356_21925	0.24	-0.5
4,906,821	+		AO356_21925	0.44	+0.2
4,906,821	+		AO356_21925	0.44	+0.2
4,906,821	+		AO356_21925	0.44	-1.4
4,906,821	+		AO356_21925	0.44	-0.2
4,906,821	+		AO356_21925	0.44	-0.2
4,906,822	-		AO356_21925	0.44	-0.9
4,906,822	-		AO356_21925	0.44	-0.4
4,906,822	-		AO356_21925	0.44	+0.6
4,906,822	-		AO356_21925	0.44	-0.5
4,906,822	-		AO356_21925	0.44	-1.1
4,906,822	-		AO356_21925	0.44	-0.8
4,906,822	-		AO356_21925	0.44	-0.7
4,906,838	+		AO356_21925	0.48	-1.5
4,906,839	-		AO356_21925	0.48	-0.1
4,906,839	-		AO356_21925	0.48	-1.4
4,906,839	-		AO356_21925	0.48	+0.2
4,906,875	+		AO356_21925	0.57	-1.1
4,906,876	-		AO356_21925	0.57	-0.2
4,906,876	-		AO356_21925	0.57	+0.1
4,906,887	+		AO356_21925	0.60	-1.5
4,906,887	+		AO356_21925	0.60	-1.9
4,906,887	+		AO356_21925	0.60	-2.8
4,906,953	+		AO356_21925	0.76	-0.4
4,906,953	+		AO356_21925	0.76	-1.7
4,906,953	+		AO356_21925	0.76	-2.3
4,906,975	-		AO356_21925	0.81	-0.5
4,906,980	+		AO356_21925	0.82	-0.7
4,906,980	+		AO356_21925	0.82	-0.3
4,906,980	+		AO356_21925	0.82	-0.9
4,906,981	-		AO356_21925	0.82	-2.0
4,906,981	-		AO356_21925	0.82	-2.1
4,907,028	-				-0.6
4,907,039	+				-1.0
4,907,040	-				-0.3
4,907,040	-				-0.0
4,907,069	+				-0.5
4,907,085	-				+0.3
4,907,192	-				+0.9
4,907,193	+				-0.7
4,907,276	-				+0.4
4,907,480	-		AO356_21930	0.11	-2.5
4,907,480	-		AO356_21930	0.11	+0.3