Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_20840

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
4,641,383	+				-0.6
4,641,383	+				-0.3
4,641,462	+				-0.0
4,641,462	+				+0.1
4,641,462	+				+1.0
4,641,462	+				+0.3
4,641,462	+				+0.3
4,641,462	+				-1.4
4,641,462	+				+0.4
4,641,462	+				-0.1
4,641,463	-				-0.3
4,641,463	-				+0.8
4,641,463	-				+0.3
4,641,463	-				-0.3
4,641,878	-		AO356_20835	0.45	-1.2
4,642,027	+		AO356_20835	0.69	-0.7
4,642,027	+		AO356_20835	0.69	+0.9
4,642,028	-		AO356_20835	0.70	+1.1
4,642,028	-		AO356_20835	0.70	-0.8
4,642,028	-		AO356_20835	0.70	-0.5
4,642,031	-		AO356_20835	0.70	+0.3
4,642,057	+		AO356_20835	0.74	+0.3
4,642,057	+		AO356_20835	0.74	-0.2
4,642,057	+		AO356_20835	0.74	-0.6
4,642,058	-		AO356_20835	0.74	-0.2
4,642,213	+				+0.1
4,642,214	-				-0.4
4,642,214	-				-0.6
4,642,214	-				-0.9
4,642,214	-				+0.4
4,642,214	-				+0.0
4,642,321	+				-1.3
4,642,321	+				-0.9
4,642,322	-				+0.0
4,642,324	-				+0.5
4,642,364	+				+0.8
4,642,364	+				-0.1
4,642,542	-		AO356_20840	0.13	-0.9
4,642,542	-		AO356_20840	0.13	+0.3
4,642,542	-		AO356_20840	0.13	-0.3
4,643,123	+		AO356_20840	0.57	-1.2
4,643,123	+		AO356_20840	0.57	-0.8
4,643,124	-		AO356_20840	0.57	+1.5
4,643,124	-		AO356_20840	0.57	-0.4
4,643,134	-		AO356_20840	0.57	+0.3
4,643,330	+		AO356_20840	0.72	+0.0
4,643,330	+		AO356_20840	0.72	-0.5
4,643,411	+		AO356_20840	0.78	-0.7
4,643,420	+		AO356_20840	0.79	+0.1
4,643,689	+				-0.5
4,643,690	-				+1.8
4,643,690	-				+0.9
4,643,746	+				-0.7
4,643,746	+				-0.8
4,643,746	+				-1.6
4,643,746	+				+0.1
4,643,756	+				+0.4
4,643,794	+				-2.2
4,643,794	+				-1.9
4,643,795	-				+0.3
4,643,795	-				+0.5
4,644,008	+				-0.2
4,644,008	+				+0.3
4,644,008	+				-0.0
4,644,009	-				-0.2
4,644,009	-				-0.5
4,644,009	-				-0.6
4,644,009	-				-2.1
4,644,220	+		AO356_20845	0.24	-1.6
4,644,220	+		AO356_20845	0.24	-0.5
4,644,221	-		AO356_20845	0.24	-0.5
4,644,241	+		AO356_20845	0.26	-2.6
4,644,241	+		AO356_20845	0.26	-0.0
4,644,242	-		AO356_20845	0.26	-2.3
4,644,242	-		AO356_20845	0.26	-1.1
4,644,242	-		AO356_20845	0.26	-1.1
4,644,242	-		AO356_20845	0.26	-1.1
4,644,505	+		AO356_20845	0.52	-1.7
4,644,505	+		AO356_20845	0.52	-2.0
4,644,506	-		AO356_20845	0.52	-1.5
4,644,583	+		AO356_20845	0.60	-1.1