Experiment: Nalidixic 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_16485 and AO356_16490 are separated by 172 nucleotides AO356_16490 and AO356_16495 overlap by 4 nucleotides
AO356_16485: AO356_16485 - hypothetical protein, at 3,724,236 to 3,725,960
_16485
AO356_16490: AO356_16490 - glutamyl-tRNA reductase, at 3,726,133 to 3,727,422
_16490
AO356_16495: AO356_16495 - peptide chain release factor 1, at 3,727,419 to 3,728,501
_16495
Position (kb)
3726
3727
3728 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3725.186 kb on - strand, within AO356_16485 at 3725.186 kb on - strand, within AO356_16485 at 3725.541 kb on - strand, within AO356_16485 at 3725.543 kb on - strand, within AO356_16485 at 3725.543 kb on - strand, within AO356_16485 at 3725.543 kb on - strand, within AO356_16485 at 3725.543 kb on - strand, within AO356_16485 at 3725.543 kb on - strand, within AO356_16485 at 3725.543 kb on - strand, within AO356_16485 at 3725.543 kb on - strand, within AO356_16485 at 3725.543 kb on - strand, within AO356_16485 at 3725.543 kb on - strand, within AO356_16485 at 3725.675 kb on - strand, within AO356_16485 at 3725.741 kb on - strand, within AO356_16485 at 3725.741 kb on - strand, within AO356_16485 at 3725.741 kb on - strand, within AO356_16485 at 3725.741 kb on - strand, within AO356_16485 at 3725.741 kb on - strand, within AO356_16485 at 3725.741 kb on - strand, within AO356_16485 at 3725.741 kb on - strand, within AO356_16485 at 3725.741 kb on - strand, within AO356_16485 at 3725.955 kb on - strand at 3725.955 kb on - strand at 3725.955 kb on - strand at 3725.955 kb on - strand at 3725.955 kb on - strand at 3725.955 kb on - strand at 3725.955 kb on - strand at 3725.955 kb on - strand at 3725.955 kb on - strand at 3725.955 kb on - strand at 3725.961 kb on - strand at 3725.961 kb on - strand at 3725.961 kb on - strand at 3725.961 kb on - strand at 3725.961 kb on - strand at 3725.961 kb on - strand at 3725.963 kb on - strand at 3725.963 kb on - strand at 3725.963 kb on - strand at 3725.963 kb on - strand at 3726.021 kb on + strand at 3726.021 kb on + strand at 3726.038 kb on + strand at 3726.039 kb on - strand at 3726.058 kb on + strand at 3726.059 kb on - strand at 3726.092 kb on + strand at 3726.092 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nalidixic 0.004 mg/ml remove 3,725,186 - AO356_16485 0.55 -4.0 3,725,186 - AO356_16485 0.55 +0.4 3,725,541 - AO356_16485 0.76 -1.2 3,725,543 - AO356_16485 0.76 -1.7 3,725,543 - AO356_16485 0.76 -1.9 3,725,543 - AO356_16485 0.76 -2.2 3,725,543 - AO356_16485 0.76 -3.3 3,725,543 - AO356_16485 0.76 -1.9 3,725,543 - AO356_16485 0.76 -2.2 3,725,543 - AO356_16485 0.76 -3.2 3,725,543 - AO356_16485 0.76 -1.7 3,725,543 - AO356_16485 0.76 -2.6 3,725,675 - AO356_16485 0.83 -3.9 3,725,741 - AO356_16485 0.87 -1.5 3,725,741 - AO356_16485 0.87 -1.3 3,725,741 - AO356_16485 0.87 -2.3 3,725,741 - AO356_16485 0.87 -1.1 3,725,741 - AO356_16485 0.87 -1.9 3,725,741 - AO356_16485 0.87 -0.2 3,725,741 - AO356_16485 0.87 -1.5 3,725,741 - AO356_16485 0.87 -2.2 3,725,955 - +0.4 3,725,955 - -0.9 3,725,955 - -1.0 3,725,955 - -0.4 3,725,955 - -2.0 3,725,955 - -2.4 3,725,955 - -1.8 3,725,955 - -1.5 3,725,955 - -1.4 3,725,955 - -2.0 3,725,961 - -0.9 3,725,961 - -0.9 3,725,961 - -0.8 3,725,961 - -2.3 3,725,961 - -0.1 3,725,961 - +0.3 3,725,963 - -1.8 3,725,963 - -1.9 3,725,963 - -0.6 3,725,963 - -1.7 3,726,021 + -0.6 3,726,021 + +0.0 3,726,038 + -1.8 3,726,039 - +0.1 3,726,058 + +0.2 3,726,059 - +0.0 3,726,092 + -0.3 3,726,092 + -1.0
Or see this region's nucleotide sequence