Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_11010

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
2,498,852	+		AO356_11005	0.35	-1.2
2,498,852	+		AO356_11005	0.35	+0.5
2,498,853	-		AO356_11005	0.35	+0.3
2,498,870	+		AO356_11005	0.36	-0.0
2,498,871	-		AO356_11005	0.36	+1.0
2,498,871	-		AO356_11005	0.36	-0.9
2,498,871	-		AO356_11005	0.36	+0.6
2,498,927	+		AO356_11005	0.41	-0.1
2,498,927	+		AO356_11005	0.41	-1.1
2,498,927	+		AO356_11005	0.41	-0.7
2,498,927	+		AO356_11005	0.41	+0.9
2,498,927	+		AO356_11005	0.41	-0.9
2,498,927	+		AO356_11005	0.41	+0.1
2,498,927	+		AO356_11005	0.41	-0.5
2,498,927	+		AO356_11005	0.41	-0.7
2,498,927	+		AO356_11005	0.41	-0.5
2,498,927	+		AO356_11005	0.41	+0.5
2,498,927	+		AO356_11005	0.41	+0.1
2,498,928	-		AO356_11005	0.41	+0.5
2,498,928	-		AO356_11005	0.41	+0.6
2,498,928	-		AO356_11005	0.41	+0.7
2,498,928	-		AO356_11005	0.41	+0.5
2,498,928	-		AO356_11005	0.41	-0.1
2,498,928	-		AO356_11005	0.41	-0.4
2,498,928	-		AO356_11005	0.41	-0.9
2,498,928	-		AO356_11005	0.41	-0.6
2,498,928	-		AO356_11005	0.41	+0.0
2,498,928	-		AO356_11005	0.41	+0.1
2,498,928	-		AO356_11005	0.41	-0.2
2,498,928	-		AO356_11005	0.41	+0.1
2,498,928	-		AO356_11005	0.41	+0.6
2,498,928	-		AO356_11005	0.41	-0.1
2,498,928	-		AO356_11005	0.41	+0.4
2,498,928	-		AO356_11005	0.41	+0.6
2,498,928	-		AO356_11005	0.41	+0.4
2,498,928	-		AO356_11005	0.41	+0.9
2,499,027	+		AO356_11005	0.48	+0.8
2,499,028	-		AO356_11005	0.48	+0.1
2,499,028	-		AO356_11005	0.48	+0.4
2,499,028	-		AO356_11005	0.48	-0.2
2,499,044	-		AO356_11005	0.49	-0.8
2,499,069	-		AO356_11005	0.51	-0.4
2,499,395	+		AO356_11005	0.76	-0.7
2,499,395	+		AO356_11005	0.76	-0.1
2,499,395	+		AO356_11005	0.76	+0.7
2,499,395	+		AO356_11005	0.76	+0.1
2,499,395	+		AO356_11005	0.76	-0.1
2,499,395	+		AO356_11005	0.76	+0.2
2,499,395	+		AO356_11005	0.76	-0.1
2,499,396	-		AO356_11005	0.76	+0.9
2,499,396	-		AO356_11005	0.76	+1.2
2,499,521	+		AO356_11005	0.85	-0.4
2,499,521	+		AO356_11005	0.85	+0.1
2,499,522	-		AO356_11005	0.86	-0.2
2,499,631	-				-0.5
2,499,652	+				+0.2
2,499,652	+				+0.9
2,499,652	+				+0.6
2,499,652	+				+0.0
2,499,652	+				-0.0
2,499,652	+				-0.2
2,499,653	-				-0.3
2,499,653	-				-0.4
2,499,724	-				+0.5
2,499,747	-				-1.1
2,499,795	+				-1.5
2,499,795	+				+0.1
2,499,795	+				-0.8
2,499,795	+				+0.5
2,499,796	-				-1.4
2,499,796	-				-0.0
2,499,796	-				+0.2
2,499,796	-				-0.2
2,499,801	+				-0.8
2,499,802	-				-0.7
2,499,802	-				-1.0
2,499,856	-				+0.2
2,500,036	+		AO356_11010	0.16	-0.3
2,500,036	+		AO356_11010	0.16	+1.2
2,500,036	+		AO356_11010	0.16	+0.1
2,500,037	-		AO356_11010	0.16	-0.5
2,500,037	-		AO356_11010	0.16	-1.2
2,500,037	-		AO356_11010	0.16	-1.8
2,500,037	-		AO356_11010	0.16	-1.0
2,500,037	-		AO356_11010	0.16	+1.0
2,500,037	-		AO356_11010	0.16	-0.8
2,500,037	-		AO356_11010	0.16	-0.3
2,500,037	-		AO356_11010	0.16	-2.5
2,500,145	+		AO356_11010	0.24	-1.7
2,500,145	+		AO356_11010	0.24	-1.5
2,500,145	+		AO356_11010	0.24	-0.8
2,500,145	+		AO356_11010	0.24	+0.0
2,500,145	+		AO356_11010	0.24	-0.8
2,500,146	-		AO356_11010	0.24	-0.0
2,500,204	+		AO356_11010	0.28	-1.2
2,500,205	-		AO356_11010	0.28	-0.6
2,500,294	+		AO356_11010	0.35	-1.4
2,500,294	+		AO356_11010	0.35	-0.7
2,500,295	-		AO356_11010	0.35	-1.5
2,500,295	-		AO356_11010	0.35	-0.2
2,500,295	-		AO356_11010	0.35	-2.6
2,500,295	-		AO356_11010	0.35	+0.1
2,500,295	-		AO356_11010	0.35	+1.0
2,500,295	-		AO356_11010	0.35	-0.8
2,500,303	+		AO356_11010	0.36	-0.1
2,500,303	+		AO356_11010	0.36	+0.8
2,500,303	+		AO356_11010	0.36	-0.3
2,500,303	+		AO356_11010	0.36	+0.8
2,500,304	-		AO356_11010	0.36	-1.4
2,500,304	-		AO356_11010	0.36	-0.3
2,500,304	-		AO356_11010	0.36	-0.5
2,500,315	+		AO356_11010	0.36	-0.4
2,500,315	+		AO356_11010	0.36	-0.4
2,500,316	-		AO356_11010	0.37	-1.2
2,500,316	-		AO356_11010	0.37	-0.8
2,500,316	-		AO356_11010	0.37	-0.1
2,500,327	+		AO356_11010	0.37	-1.1
2,500,327	+		AO356_11010	0.37	-0.1
2,500,328	-		AO356_11010	0.37	-0.4
2,500,328	-		AO356_11010	0.37	+0.6
2,500,328	-		AO356_11010	0.37	-1.3
2,500,328	-		AO356_11010	0.37	-0.1
2,500,328	-		AO356_11010	0.37	-0.7
2,500,328	-		AO356_11010	0.37	-0.8
2,500,405	+		AO356_11010	0.43	-1.2
2,500,405	+		AO356_11010	0.43	-2.3
2,500,405	+		AO356_11010	0.43	-0.3
2,500,405	+		AO356_11010	0.43	-1.9
2,500,406	-		AO356_11010	0.43	-0.4
2,500,406	-		AO356_11010	0.43	-0.3
2,500,406	-		AO356_11010	0.43	-1.0
2,500,406	-		AO356_11010	0.43	-0.2
2,500,406	-		AO356_11010	0.43	-1.2
2,500,406	-		AO356_11010	0.43	+1.1
2,500,624	+		AO356_11010	0.60	-0.3
2,500,624	+		AO356_11010	0.60	+0.5
2,500,624	+		AO356_11010	0.60	-0.0
2,500,625	-		AO356_11010	0.60	-0.1
2,500,839	+		AO356_11010	0.76	-0.8
2,500,840	-		AO356_11010	0.76	-0.8
2,500,840	-		AO356_11010	0.76	-1.3
2,500,840	-		AO356_11010	0.76	-0.0
2,500,849	+		AO356_11010	0.76	-1.0
2,500,933	+		AO356_11010	0.83	+0.0
2,500,933	+		AO356_11010	0.83	-1.3
2,500,934	-		AO356_11010	0.83	+1.6
2,500,934	-		AO356_11010	0.83	-0.6
2,501,044	+				+0.4
2,501,044	+				-0.7
2,501,044	+				-0.6
2,501,044	+				-1.2
2,501,044	+				-1.6
2,501,044	+				-0.4
2,501,045	-				-1.2
2,501,045	-				+0.1
2,501,045	-				+0.1
2,501,255	-				-0.2
2,501,255	-				-0.6
2,501,255	-				-0.6
2,501,286	+				+0.7
2,501,287	-				+0.3
2,501,287	-				-0.7
2,501,287	-				+0.1
2,501,378	+				+0.4
2,501,378	+				-0.4
2,501,378	+				-0.3
2,501,378	+				+1.2
2,501,379	-				-0.9
2,501,438	+				+0.0
2,501,439	-				+0.6
2,501,651	+		AO356_11015	0.24	-0.3
2,501,651	+		AO356_11015	0.24	-0.3
2,501,651	+		AO356_11015	0.24	+0.9
2,501,651	+		AO356_11015	0.24	-0.7
2,501,651	+		AO356_11015	0.24	-0.6
2,501,651	+		AO356_11015	0.24	+0.3
2,501,651	+		AO356_11015	0.24	-0.3
2,501,652	-		AO356_11015	0.24	-0.5
2,501,652	-		AO356_11015	0.24	-0.0
2,501,652	-		AO356_11015	0.24	+0.4
2,501,652	-		AO356_11015	0.24	-0.5
2,501,652	-		AO356_11015	0.24	+1.1
2,501,652	-		AO356_11015	0.24	+0.3
2,501,831	+		AO356_11015	0.44	-0.8
2,501,831	+		AO356_11015	0.44	+0.5
2,501,831	+		AO356_11015	0.44	+0.0
2,501,832	-		AO356_11015	0.44	+0.1
2,501,832	-		AO356_11015	0.44	-0.3
2,501,832	-		AO356_11015	0.44	-1.8
2,501,832	-		AO356_11015	0.44	-0.7
2,501,930	+		AO356_11015	0.55	-1.2
2,501,947	-		AO356_11015	0.57	-0.5
2,501,947	-		AO356_11015	0.57	-0.0
2,501,948	+		AO356_11015	0.57	-0.4
2,501,948	+		AO356_11015	0.57	-0.2
2,501,948	+		AO356_11015	0.57	+0.4
2,501,948	+		AO356_11015	0.57	+0.2
2,501,948	+		AO356_11015	0.57	+0.5
2,501,949	-		AO356_11015	0.57	+0.5
2,501,949	-		AO356_11015	0.57	-0.4
2,501,949	-		AO356_11015	0.57	+0.2
2,501,949	-		AO356_11015	0.57	-0.8
2,501,949	-		AO356_11015	0.57	-1.6
2,501,949	-		AO356_11015	0.57	+0.5
2,501,949	-		AO356_11015	0.57	+0.2
2,501,949	-		AO356_11015	0.57	-0.0
2,501,949	-		AO356_11015	0.57	-1.2
2,501,949	-		AO356_11015	0.57	+0.0
2,501,949	-		AO356_11015	0.57	-0.5
2,501,949	-		AO356_11015	0.57	+0.4
2,501,949	-		AO356_11015	0.57	-0.4
2,501,949	-		AO356_11015	0.57	-1.0
2,501,949	-		AO356_11015	0.57	-0.4
2,502,095	+		AO356_11015	0.73	-0.2
2,502,095	+		AO356_11015	0.73	+0.1
2,502,095	+		AO356_11015	0.73	-0.4
2,502,096	-		AO356_11015	0.73	-0.2
2,502,096	-		AO356_11015	0.73	-0.3
2,502,145	-		AO356_11015	0.79	-0.1