Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_10430

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
2,352,827	+		AO356_10425	0.17	-0.3
2,352,828	-		AO356_10425	0.17	-0.2
2,352,828	-		AO356_10425	0.17	+0.2
2,352,828	-		AO356_10425	0.17	+0.1
2,352,874	-		AO356_10425	0.23	+1.0
2,352,893	+		AO356_10425	0.26	-0.3
2,352,893	+		AO356_10425	0.26	-0.7
2,352,893	+		AO356_10425	0.26	+0.2
2,352,893	+		AO356_10425	0.26	-0.2
2,352,893	+		AO356_10425	0.26	+1.0
2,352,893	+		AO356_10425	0.26	+0.3
2,352,893	+		AO356_10425	0.26	+1.3
2,352,893	+		AO356_10425	0.26	-0.1
2,352,893	+		AO356_10425	0.26	+0.7
2,352,893	+		AO356_10425	0.26	+1.8
2,352,893	+		AO356_10425	0.26	+0.2
2,352,893	+		AO356_10425	0.26	-0.4
2,352,893	+		AO356_10425	0.26	+0.3
2,352,893	+		AO356_10425	0.26	-0.4
2,352,893	+		AO356_10425	0.26	-0.0
2,352,894	-		AO356_10425	0.26	+0.3
2,352,894	-		AO356_10425	0.26	+0.3
2,352,894	-		AO356_10425	0.26	-0.4
2,352,894	-		AO356_10425	0.26	-0.8
2,352,894	-		AO356_10425	0.26	-2.7
2,352,894	-		AO356_10425	0.26	-0.4
2,352,894	-		AO356_10425	0.26	-0.3
2,352,894	-		AO356_10425	0.26	+1.0
2,352,894	-		AO356_10425	0.26	-0.7
2,352,894	-		AO356_10425	0.26	-0.8
2,353,139	+		AO356_10425	0.57	-1.1
2,353,139	+		AO356_10425	0.57	+0.4
2,353,140	-		AO356_10425	0.57	-1.7
2,353,140	-		AO356_10425	0.57	+0.5
2,353,140	-		AO356_10425	0.57	-1.1
2,353,151	+		AO356_10425	0.59	+0.2
2,353,151	+		AO356_10425	0.59	-1.0
2,353,229	+		AO356_10425	0.69	+0.1
2,353,229	+		AO356_10425	0.69	+0.2
2,353,247	+		AO356_10425	0.71	-0.0
2,353,247	+		AO356_10425	0.71	-0.7
2,353,247	+		AO356_10425	0.71	+1.2
2,353,247	+		AO356_10425	0.71	-0.2
2,353,247	+		AO356_10425	0.71	-0.7
2,353,248	-		AO356_10425	0.71	+0.2
2,353,248	-		AO356_10425	0.71	+0.2
2,353,248	-		AO356_10425	0.71	-0.1
2,353,248	-		AO356_10425	0.71	+0.5
2,353,295	+		AO356_10425	0.77	+0.1
2,353,295	+		AO356_10425	0.77	+0.3
2,353,295	+		AO356_10425	0.77	-0.7
2,353,295	+		AO356_10425	0.77	+0.7
2,353,516	+				-0.3
2,353,517	-				-0.6
2,353,565	+				-0.3
2,353,566	-				+0.5
2,353,566	-				-0.6
2,353,566	-				-0.0
2,353,566	-				+0.7
2,353,592	-				-0.9
2,353,631	+				+0.2
2,353,756	+				-1.4
2,353,756	+				+0.4
2,354,041	+		AO356_10430	0.31	-0.3
2,354,041	+		AO356_10430	0.31	-0.4
2,354,041	+		AO356_10430	0.31	+0.1
2,354,042	-		AO356_10430	0.31	+0.0
2,354,042	-		AO356_10430	0.31	-1.6
2,354,042	-		AO356_10430	0.31	+0.1
2,354,042	-		AO356_10430	0.31	-0.3
2,354,042	-		AO356_10430	0.31	-0.0
2,354,042	-		AO356_10430	0.31	-0.6
2,354,042	-		AO356_10430	0.31	+0.2
2,354,042	-		AO356_10430	0.31	+0.4
2,354,056	+		AO356_10430	0.32	+0.0
2,354,057	-		AO356_10430	0.32	-0.1
2,354,057	-		AO356_10430	0.32	+0.5
2,354,128	+		AO356_10430	0.40	-0.1
2,354,128	+		AO356_10430	0.40	+0.1
2,354,128	+		AO356_10430	0.40	-0.4
2,354,129	-		AO356_10430	0.40	-1.5
2,354,135	-		AO356_10430	0.41	-0.3
2,354,135	-		AO356_10430	0.41	-0.1
2,354,317	+		AO356_10430	0.60	+0.1
2,354,317	+		AO356_10430	0.60	-0.6
2,354,317	+		AO356_10430	0.60	-0.5
2,354,317	+		AO356_10430	0.60	+0.3
2,354,317	+		AO356_10430	0.60	+0.7
2,354,318	-		AO356_10430	0.60	+0.2
2,354,318	-		AO356_10430	0.60	+0.4
2,354,377	+		AO356_10430	0.66	-0.3
2,354,377	+		AO356_10430	0.66	+0.7
2,354,377	+		AO356_10430	0.66	+1.0
2,354,377	+		AO356_10430	0.66	-0.6
2,354,377	+		AO356_10430	0.66	-0.4
2,354,392	+		AO356_10430	0.68	+0.3
2,354,416	+		AO356_10430	0.71	-0.3
2,354,416	+		AO356_10430	0.71	-0.7
2,354,416	+		AO356_10430	0.71	-0.6
2,354,417	-		AO356_10430	0.71	-0.4
2,354,417	-		AO356_10430	0.71	-1.3
2,354,483	+		AO356_10430	0.78	-0.1
2,354,483	+		AO356_10430	0.78	+0.7
2,354,483	+		AO356_10430	0.78	-0.6
2,354,483	+		AO356_10430	0.78	-1.1
2,354,484	-		AO356_10430	0.78	-1.2
2,354,526	+		AO356_10430	0.82	-0.2
2,354,526	+		AO356_10430	0.82	+0.0
2,354,527	-		AO356_10430	0.82	-0.6
2,354,784	+				+0.7
2,354,784	+				-0.9
2,354,785	-				-0.7
2,354,790	+				-0.4
2,354,790	+				-0.4
2,354,791	-				-0.9
2,354,791	-				+0.6
2,354,791	-				+1.0
2,354,836	+		AO356_10435	0.17	+0.0
2,354,836	+		AO356_10435	0.17	+0.3
2,354,837	-		AO356_10435	0.17	-0.9
2,354,837	-		AO356_10435	0.17	-0.8
2,354,837	-		AO356_10435	0.17	+0.3
2,354,837	-		AO356_10435	0.17	-1.3
2,354,837	-		AO356_10435	0.17	-0.1
2,355,297	+				-0.2
2,355,298	-				+0.3
2,355,353	+				-0.4
2,355,353	+				-1.5
2,355,353	+				+0.8
2,355,353	+				+0.6
2,355,354	-				+0.1
2,355,355	+				+0.8
2,355,355	+				-1.0
2,355,355	+				+0.8
2,355,355	+				-0.3
2,355,355	+				-1.0
2,355,355	+				+0.3
2,355,355	+				-1.0
2,355,356	-				-0.2
2,355,356	-				+0.5
2,355,356	-				-1.0
2,355,356	-				+0.2
2,355,356	-				+0.2
2,355,356	-				+0.1
2,355,369	-				-0.9
2,355,369	-				+0.4
2,355,422	+				-1.1
2,355,479	+				-0.6
2,355,479	+				+0.7
2,355,480	-				-0.3
2,355,480	-				+0.4
2,355,480	-				+0.4
2,355,480	-				+0.2
2,355,488	+				+0.3
2,355,488	+				+0.2
2,355,489	-				-1.0
2,355,489	-				+0.5
2,355,542	+				+0.2
2,355,577	-		AO356_10440	0.20	-0.2
2,355,577	-		AO356_10440	0.20	-0.8
2,355,577	-		AO356_10440	0.20	+0.6
2,355,577	-		AO356_10440	0.20	-1.2
2,355,577	-		AO356_10440	0.20	-1.6
2,355,577	-		AO356_10440	0.20	-0.3
2,355,577	-		AO356_10440	0.20	-0.3
2,355,577	-		AO356_10440	0.20	+0.6
2,355,577	-		AO356_10440	0.20	+0.4
2,355,577	-		AO356_10440	0.20	+0.5