Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_09415

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
2,130,148	+		AO356_09405	0.32	+0.2
2,130,149	-		AO356_09405	0.33	+2.1
2,130,149	-		AO356_09405	0.33	-0.2
2,130,149	-		AO356_09405	0.33	+1.3
2,130,149	-		AO356_09405	0.33	-1.0
2,130,276	+		AO356_09405	0.53	+0.3
2,130,276	+		AO356_09405	0.53	-0.5
2,130,277	-		AO356_09405	0.53	+0.7
2,130,277	-		AO356_09405	0.53	+0.0
2,130,277	-		AO356_09405	0.53	+0.0
2,130,277	-		AO356_09405	0.53	-1.1
2,130,277	-		AO356_09405	0.53	-1.1
2,130,277	-		AO356_09405	0.53	-0.4
2,130,277	-		AO356_09405	0.53	-0.5
2,130,277	-		AO356_09405	0.53	+0.4
2,130,277	-		AO356_09405	0.53	-1.2
2,130,277	-		AO356_09405	0.53	+0.1
2,130,316	+		AO356_09405	0.59	+0.0
2,130,316	+		AO356_09405	0.59	+1.1
2,130,317	-		AO356_09405	0.59	-0.2
2,130,317	-		AO356_09405	0.59	-2.1
2,130,372	-		AO356_09405	0.68	+0.3
2,130,428	+		AO356_09405	0.77	+0.5
2,130,428	+		AO356_09405	0.77	+0.0
2,130,429	-		AO356_09405	0.77	+0.5
2,130,429	-		AO356_09405	0.77	-0.1
2,130,429	-		AO356_09405	0.77	-0.1
2,130,430	+		AO356_09405	0.78	-0.2
2,130,431	-		AO356_09405	0.78	-0.1
2,130,792	+		AO356_09410	0.40	+0.9
2,130,792	+		AO356_09410	0.40	+0.8
2,130,792	+		AO356_09410	0.40	+0.2
2,130,792	+		AO356_09410	0.40	+1.4
2,130,792	+		AO356_09410	0.40	+0.6
2,130,792	+		AO356_09410	0.40	-0.1
2,130,793	-		AO356_09410	0.40	+0.9
2,130,793	-		AO356_09410	0.40	+1.5
2,130,793	-		AO356_09410	0.40	-0.2
2,130,793	-		AO356_09410	0.40	+0.4
2,130,793	-		AO356_09410	0.40	-0.1
2,130,970	+		AO356_09410	0.71	+1.3
2,130,970	+		AO356_09410	0.71	+0.2
2,130,971	-		AO356_09410	0.71	-0.2
2,131,008	+		AO356_09410	0.78	-0.4
2,131,009	-		AO356_09410	0.78	+1.2
2,131,009	-		AO356_09410	0.78	+1.1
2,131,009	-		AO356_09410	0.78	+0.5
2,131,233	+				+0.4
2,131,344	-		AO356_09415	0.20	+1.1
2,131,431	-		AO356_09415	0.28	-0.7
2,131,431	-		AO356_09415	0.28	-0.2
2,131,431	-		AO356_09415	0.28	-0.4
2,131,545	+		AO356_09415	0.39	+0.0
2,131,547	+		AO356_09415	0.39	-0.1
2,131,547	+		AO356_09415	0.39	-0.3
2,131,547	+		AO356_09415	0.39	+0.5
2,131,547	+		AO356_09415	0.39	+0.5
2,131,547	+		AO356_09415	0.39	-0.2
2,131,547	+		AO356_09415	0.39	+0.1
2,131,547	+		AO356_09415	0.39	-0.6
2,131,547	+		AO356_09415	0.39	-0.9
2,131,547	+		AO356_09415	0.39	-0.9
2,131,547	+		AO356_09415	0.39	+0.4
2,131,547	+		AO356_09415	0.39	+0.0
2,131,547	+		AO356_09415	0.39	+0.2
2,131,548	-		AO356_09415	0.39	+0.7
2,131,548	-		AO356_09415	0.39	-0.5
2,131,548	-		AO356_09415	0.39	-0.1
2,131,548	-		AO356_09415	0.39	-0.5
2,131,548	-		AO356_09415	0.39	+0.0
2,131,548	-		AO356_09415	0.39	+0.5
2,131,548	-		AO356_09415	0.39	-0.6
2,131,548	-		AO356_09415	0.39	-0.5
2,131,548	-		AO356_09415	0.39	+0.3
2,131,548	-		AO356_09415	0.39	+0.2
2,131,679	+		AO356_09415	0.51	-0.5
2,131,680	-		AO356_09415	0.51	-0.1
2,131,856	+		AO356_09415	0.68	+0.1
2,131,856	+		AO356_09415	0.68	-1.8
2,131,856	+		AO356_09415	0.68	-0.6
2,131,857	-		AO356_09415	0.68	+1.3
2,131,857	-		AO356_09415	0.68	-1.1
2,132,192	-				-0.2
2,132,192	-				+0.4
2,132,192	-				+0.4
2,132,197	+				-0.4
2,132,209	-				+0.2
2,132,236	+				-0.0
2,132,236	+				+0.2
2,132,236	+				+0.1
2,132,236	+				-0.6
2,132,236	+				+0.3
2,132,236	+				-0.1
2,132,237	-				-0.3
2,132,237	-				-1.6
2,132,240	-				-1.5
2,132,240	-				-1.0
2,132,240	-				-0.7
2,132,240	-				-1.1
2,132,307	+				+0.6
2,132,307	+				-0.6
2,132,307	+				-0.1
2,132,307	+				-0.3
2,132,307	+				-0.3
2,132,308	-				-1.0
2,132,308	-				-0.7
2,132,308	-				+0.1
2,132,308	-				-0.2
2,132,308	-				-2.0
2,132,308	-				-0.7
2,132,308	-				-0.5
2,132,309	+				-1.6
2,132,309	+				+0.6
2,132,309	+				+0.2
2,132,309	+				-0.4
2,132,309	+				+0.8
2,132,309	+				-0.9
2,132,310	-				-1.0
2,132,310	-				-2.6
2,132,310	-				-1.2
2,132,486	+				-1.0
2,132,486	+				+0.5
2,132,487	-				-0.7
2,132,487	-				-2.8
2,132,491	+				-1.0
2,132,491	+				+0.6
2,132,491	+				-1.0
2,132,491	+				-0.9
2,132,492	-				-1.4
2,132,492	-				-1.0
2,132,492	-				-0.6
2,132,527	+				-0.3
2,132,527	+				+0.8
2,132,528	-				-0.9
2,132,528	-				-0.6
2,132,528	-				-1.3
2,132,528	-				-2.8
2,132,528	-				-0.6
2,132,555	+				-0.4
2,132,555	+				-0.0
2,132,556	-				-1.6
2,132,649	+		AO356_09420	0.10	+0.2
2,132,650	-		AO356_09420	0.10	-1.9
2,132,652	+		AO356_09420	0.10	+0.1
2,132,652	+		AO356_09420	0.10	-0.0
2,132,652	+		AO356_09420	0.10	-0.2
2,132,652	+		AO356_09420	0.10	-0.8
2,132,653	-		AO356_09420	0.10	-2.3
2,132,653	-		AO356_09420	0.10	-1.3
2,132,653	-		AO356_09420	0.10	-0.7
2,132,653	-		AO356_09420	0.10	-1.6
2,132,653	-		AO356_09420	0.10	-1.9
2,132,653	-		AO356_09420	0.10	-1.8
2,132,669	-		AO356_09420	0.11	-1.7
2,132,684	+		AO356_09420	0.12	+0.0
2,132,685	-		AO356_09420	0.12	-1.6
2,132,891	+		AO356_09420	0.20	+0.4
2,132,891	+		AO356_09420	0.20	-0.9
2,132,891	+		AO356_09420	0.20	-1.3
2,132,891	+		AO356_09420	0.20	+0.2
2,132,892	-		AO356_09420	0.20	-1.1
2,132,906	+		AO356_09420	0.21	-1.0
2,132,906	+		AO356_09420	0.21	+0.7
2,132,906	+		AO356_09420	0.21	-0.8
2,132,907	-		AO356_09420	0.21	-1.6
2,132,907	-		AO356_09420	0.21	-1.9
2,132,907	-		AO356_09420	0.21	-1.0
2,132,951	+		AO356_09420	0.22	-1.0
2,132,951	+		AO356_09420	0.22	-1.0
2,132,952	-		AO356_09420	0.22	-1.1
2,132,952	-		AO356_09420	0.22	-0.8
2,132,952	-		AO356_09420	0.22	-2.7
2,132,952	-		AO356_09420	0.22	-2.0
2,132,952	-		AO356_09420	0.22	-1.4
2,132,952	-		AO356_09420	0.22	-0.1
2,132,952	-		AO356_09420	0.22	-0.0
2,132,954	+		AO356_09420	0.23	+0.1
2,132,954	+		AO356_09420	0.23	-0.5
2,132,955	-		AO356_09420	0.23	-1.7
2,133,092	+		AO356_09420	0.28	+0.2
2,133,092	+		AO356_09420	0.28	-1.0
2,133,092	+		AO356_09420	0.28	-1.0
2,133,092	+		AO356_09420	0.28	-0.8
2,133,092	+		AO356_09420	0.28	-0.2
2,133,092	+		AO356_09420	0.28	-0.4
2,133,092	+		AO356_09420	0.28	-1.0
2,133,092	+		AO356_09420	0.28	-0.6
2,133,092	+		AO356_09420	0.28	-0.7
2,133,092	+		AO356_09420	0.28	+1.2
2,133,093	-		AO356_09420	0.28	-1.0
2,133,093	-		AO356_09420	0.28	-0.5
2,133,093	-		AO356_09420	0.28	-0.9
2,133,093	-		AO356_09420	0.28	-0.5
2,133,093	-		AO356_09420	0.28	-1.7
2,133,093	-		AO356_09420	0.28	+2.1
2,133,093	-		AO356_09420	0.28	-0.4
2,133,093	-		AO356_09420	0.28	-0.5
2,133,093	-		AO356_09420	0.28	-0.4
2,133,122	+		AO356_09420	0.29	+0.2
2,133,123	-		AO356_09420	0.29	+0.2
2,133,158	+		AO356_09420	0.31	-0.5
2,133,158	+		AO356_09420	0.31	+0.5
2,133,158	+		AO356_09420	0.31	-0.5
2,133,159	-		AO356_09420	0.31	+0.2
2,133,159	-		AO356_09420	0.31	-0.9
2,133,159	-		AO356_09420	0.31	-1.4
2,133,159	-		AO356_09420	0.31	-0.6
2,133,159	-		AO356_09420	0.31	-2.1
2,133,159	-		AO356_09420	0.31	-0.7
2,133,159	-		AO356_09420	0.31	-1.4
2,133,191	+		AO356_09420	0.32	+1.1
2,133,191	+		AO356_09420	0.32	-1.1
2,133,191	+		AO356_09420	0.32	-0.2
2,133,191	+		AO356_09420	0.32	-0.2
2,133,191	+		AO356_09420	0.32	+1.1
2,133,192	-		AO356_09420	0.32	+0.4