Strain Fitness in Shewanella loihica PV-4 around Shew_3722

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
4,427,790	+		Shew_3721	0.24	+0.2
4,427,919	-		Shew_3721	0.37	+0.6
4,427,972	+		Shew_3721	0.42	-0.1
4,427,972	+		Shew_3721	0.42	+0.0
4,428,267	+		Shew_3721	0.71	-0.4
4,428,326	-		Shew_3721	0.77	-0.9
4,428,497	-				-0.4
4,428,596	+				+0.0
4,428,812	+				+1.0
4,428,830	-				-0.0
4,429,068	-		Shew_3722	0.16	-1.0
4,429,095	-		Shew_3722	0.17	-1.1
4,429,373	-		Shew_3722	0.33	+0.4
4,429,483	+		Shew_3722	0.39	-0.3
4,429,993	+		Shew_3722	0.68	+0.2
4,429,994	+		Shew_3722	0.68	+0.4
4,430,129	+		Shew_3722	0.75	-0.2
4,430,978	-		Shew_3723	0.31	+0.4
4,430,997	-		Shew_3723	0.32	+0.1
4,431,037	+		Shew_3723	0.36	+0.0
4,431,480	-		Shew_3723	0.81	+0.3