Strain Fitness in Shewanella loihica PV-4 around Shew_2782

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
3,290,032	-		Shew_2781	0.38	-0.3
3,290,099	+		Shew_2781	0.43	+0.2
3,290,107	-		Shew_2781	0.43	-0.0
3,290,410	+		Shew_2781	0.64	+0.1
3,290,514	+		Shew_2781	0.71	-0.1
3,290,644	-		Shew_2781	0.79	+0.1
3,290,664	+		Shew_2781	0.81	-0.6
3,291,008	+				+0.2
3,291,364	+		Shew_2782	0.40	+0.1
3,291,563	-		Shew_2782	0.64	-0.8
3,291,736	+		Shew_2782	0.84	-1.4
3,291,935	-				-1.0
3,291,996	-				+0.0
3,292,018	+				+0.0
3,292,265	-				+0.3
3,292,359	+		Shew_2783	0.15	+0.3
3,292,359	+		Shew_2783	0.15	-0.1
3,292,407	+		Shew_2783	0.18	-0.1
3,292,446	-		Shew_2783	0.21	+0.0
3,292,508	+		Shew_2783	0.26	+0.1
3,292,516	-		Shew_2783	0.26	+0.5
3,292,521	-		Shew_2783	0.27	-0.2
3,292,624	-		Shew_2783	0.34	+0.5
3,292,666	+		Shew_2783	0.37	-0.0
3,292,674	-		Shew_2783	0.38	-0.2
3,292,833	+		Shew_2783	0.50	-0.9
3,292,833	+		Shew_2783	0.50	+0.0
3,292,841	-		Shew_2783	0.50	+0.4