Strain Fitness in Shewanella loihica PV-4 around Shew_2759

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
3,261,624	-		Shew_2757	0.47	+0.0
3,261,675	+		Shew_2757	0.60	-0.1
3,261,675	+		Shew_2757	0.60	+0.2
3,261,836	+				+0.2
3,261,852	+				+0.5
3,261,860	-				+0.2
3,261,864	+				+0.3
3,262,491	+				+0.6
3,262,558	+				+0.1
3,262,953	+		Shew_2759	0.18	+0.4
3,263,063	-		Shew_2759	0.22	+0.2
3,263,205	-		Shew_2759	0.27	+0.4
3,263,294	-		Shew_2759	0.30	-0.1
3,263,358	-		Shew_2759	0.32	+0.1
3,263,449	-		Shew_2759	0.35	-0.1
3,263,466	+		Shew_2759	0.36	+0.4
3,263,544	-		Shew_2759	0.39	+0.5
3,263,576	-		Shew_2759	0.40	+0.2
3,263,586	-		Shew_2759	0.40	+0.5
3,263,679	+		Shew_2759	0.43	-0.9
3,263,679	+		Shew_2759	0.43	+0.6
3,263,867	-		Shew_2759	0.50	-0.4
3,264,028	-		Shew_2759	0.56	+3.3
3,264,236	-		Shew_2759	0.63	+0.6
3,264,580	-		Shew_2759	0.75	+1.0
3,264,700	+		Shew_2759	0.80	+0.3
3,264,842	+		Shew_2759	0.85	+0.3
3,265,107	-				+0.3
3,265,108	+				+0.6