Strain Fitness in Shewanella loihica PV-4 around Shew_2657

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
3,130,038	+		Shew_2656	0.38	+0.2
3,130,274	-		Shew_2656	0.63	-0.3
3,130,281	+		Shew_2656	0.64	+0.7
3,130,289	-		Shew_2656	0.65	-0.2
3,130,329	-		Shew_2656	0.70	+0.2
3,130,429	+		Shew_2656	0.80	+0.0
3,130,610	-				+0.6
3,130,702	-				-0.3
3,130,765	-				+0.5
3,130,770	+				+0.1
3,131,070	-		Shew_2657	0.22	+0.1
3,131,101	-		Shew_2657	0.25	+0.6
3,131,179	-		Shew_2657	0.31	-0.2
3,131,219	-		Shew_2657	0.34	+0.6
3,131,224	-		Shew_2657	0.35	+0.1
3,131,464	+		Shew_2657	0.54	+0.9
3,131,772	+		Shew_2657	0.78	+0.3
3,131,890	+		Shew_2657	0.87	+0.1
3,131,955	-				-0.2
3,132,008	+				+0.4
3,132,078	+				-0.7
3,132,798	+				+0.5
3,132,833	-				-0.5