Strain Fitness in Shewanella loihica PV-4 around Shew_2611

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
3,077,384	+		Shew_2610	0.49	-0.9
3,077,510	+		Shew_2610	0.56	+0.0
3,077,542	+		Shew_2610	0.57	+0.4
3,077,623	+		Shew_2610	0.61	+0.2
3,077,631	-		Shew_2610	0.62	-0.7
3,077,641	+		Shew_2610	0.62	+0.1
3,077,715	-		Shew_2610	0.66	-0.8
3,078,155	+		Shew_2610	0.88	-0.0
3,078,423	+				-0.9
3,078,655	-		Shew_2611	0.34	-2.5
3,078,658	+		Shew_2611	0.34	-0.4
3,078,742	+		Shew_2611	0.45	-1.1
3,078,873	+		Shew_2611	0.61	+1.5
3,079,046	+		Shew_2611	0.83	-0.8
3,079,190	+				+0.0
3,079,190	-				-0.9
3,079,423	-		Shew_2612	0.12	-0.2
3,079,506	-		Shew_2612	0.20	-0.3
3,079,692	-		Shew_2612	0.38	+0.0
3,079,942	+		Shew_2612	0.62	+0.3