Strain Fitness in Shewanella loihica PV-4 around Shew_2550

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
3,006,936	+		Shew_2549	0.14	-0.3
3,007,225	+		Shew_2549	0.61	-2.0
3,008,726	-		Shew_2551	0.51	-0.7
3,008,795	+		Shew_2551	0.58	+0.7
3,008,806	+		Shew_2551	0.59	+0.0
3,008,847	-		Shew_2551	0.63	+0.1
3,009,230	-				-0.3
3,009,241	-				+0.8