Strain Fitness in Shewanella loihica PV-4 around Shew_2548

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
3,004,002	+				-0.1
3,004,242	-		Shew_2547	0.30	+0.1
3,004,242	-		Shew_2547	0.30	+1.1
3,004,394	+		Shew_2547	0.47	-0.4
3,004,394	+		Shew_2547	0.47	+0.2
3,004,545	+		Shew_2547	0.65	-0.4
3,005,117	+		Shew_2548	0.13	-0.3
3,005,149	-		Shew_2548	0.15	-0.7
3,005,512	+		Shew_2548	0.33	+0.4
3,005,515	-		Shew_2548	0.33	-0.7
3,005,738	+		Shew_2548	0.44	+0.5
3,005,796	-		Shew_2548	0.47	-1.0
3,005,798	+		Shew_2548	0.47	-0.6
3,006,486	+		Shew_2548	0.82	-0.2
3,006,936	+		Shew_2549	0.14	-0.3
3,007,225	+		Shew_2549	0.61	-2.0