Strain Fitness in Shewanella loihica PV-4 around Shew_2362

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
2,762,211	-		Shew_2361	0.44	+3.2
2,762,366	+		Shew_2361	0.59	+0.1
2,762,407	+		Shew_2361	0.63	-0.2
2,762,433	+		Shew_2361	0.66	-0.3
2,762,975	+				+0.3
2,763,012	+				-0.3
2,763,198	-		Shew_2362	0.22	-0.3
2,763,643	+		Shew_2362	0.71	-1.2
2,763,643	+		Shew_2362	0.71	+0.3
2,763,723	+		Shew_2362	0.80	-1.0
2,764,270	+		Shew_2363	0.34	+0.6
2,764,409	-		Shew_2363	0.48	+0.5
2,764,473	+		Shew_2363	0.54	-0.0
2,764,547	+		Shew_2363	0.62	-0.1
2,764,555	-		Shew_2363	0.62	-0.3
2,764,894	-				-0.2