Strain Fitness in Shewanella loihica PV-4 around Shew_2340

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
2,733,331	+				+0.2
2,733,473	+		Shew_2339	0.26	-2.4
2,733,492	+		Shew_2339	0.30	-0.1
2,733,500	-		Shew_2339	0.31	-0.0
2,733,500	-		Shew_2339	0.31	+0.1
2,733,515	-		Shew_2339	0.34	+0.0
2,734,072	-		Shew_2340	0.19	-0.5
2,734,072	-		Shew_2340	0.19	-0.6
2,734,129	-		Shew_2340	0.30	-1.2
2,734,162	-		Shew_2340	0.37	-0.2
2,734,890	-		Shew_2341	0.25	-0.6