Strain Fitness in Shewanella loihica PV-4 around Shew_2137

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
2,483,225	-				+0.3
2,483,506	+		Shew_2136	0.22	+0.3
2,483,514	-		Shew_2136	0.24	-0.0
2,483,514	-		Shew_2136	0.24	+0.1
2,483,708	+		Shew_2136	0.52	-0.6
2,483,716	-		Shew_2136	0.53	-1.1
2,484,057	+				+0.3
2,484,057	+				-1.4
2,484,087	+				-0.5
2,484,277	-				+0.3
2,485,087	+		Shew_2137	0.85	+0.4
2,485,692	-		Shew_2139	0.18	-0.0
2,485,781	+		Shew_2139	0.36	-0.5
2,485,940	-		Shew_2139	0.69	-0.1
2,486,008	-		Shew_2139	0.83	-0.3